TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Ulcerative Colitis (UC)
:
←
→
chr11:1,613,255-2,161,858
Best TWAS P=1.81e-08 · Best GWAS P=1.36e-07 conditioned to 1
1.6M
1.7M
1.8M
1.9M
2M
2.1M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Brain Lower Grade Glioma
LSP1
0.06
0.04
enet
6
0.04
3.1e-05
5.2
5.6
1.8e-08
0.97
0
1
TRUE
2
The Cancer Genome Atlas
Ovarian Serous Cystadenocarcinoma
TNNI2
0.11
0.09
lasso
2
0.08
4.1e-06
5.3
-5.3
1.4e-07
-1.00
0
1
FALSE