Best TWAS P=1.81e-08 · Best GWAS P=1.36e-07 conditioned to 1
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Brain Lower Grade Glioma | LSP1 | 0.06 | 0.04 | enet | 6 | 0.04 | 3.1e-05 | 5.2 | 5.6 | 1.8e-08 | 0.97 | 0 | 1 | TRUE |
| 2 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | TNNI2 | 0.11 | 0.09 | lasso | 2 | 0.08 | 4.1e-06 | 5.3 | -5.3 | 1.4e-07 | -1.00 | 0 | 1 | FALSE |