TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Ulcerative Colitis (UC)
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chr1:200,014,178-201,528,243
Best TWAS P=7.14e-12 · Best GWAS P=4.26e-16 conditioned to 1.59e-07
200M
200.2M
200.4M
200.6M
200.8M
201M
201.2M
201.4M
201.6M
0
5
10
15
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Testicular Germ Cell Tumors
CAMSAP1L1
0.17
0.02
enet
12
0.12
5.4e-05
-8.1
6.8
7.1e-12
-0.55
0.00
0.90
TRUE
1
GTEx
Cells Transformed fibroblasts
CAMSAP2
0.19
0.00
enet
19
0.03
5.1e-03
-6.4
5.3
8.8e-08
-0.39
0.11
0.57
FALSE