Best TWAS P=1.6e-07 · Best GWAS P=1.68e-08 conditioned to 0.00413
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Thyroid | NID2 | 0.16 | 0.08 | lasso | 5 | 0.08 | 9.7e-07 | 4.6 | -5.1 | 3.1e-07 | -0.61 | 0.20 | 0.78 | FALSE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | NID2 | 0.06 | 0.03 | blup | 120 | 0.02 | 3.5e-03 | 4.6 | -5.2 | 1.6e-07 | -0.67 | 0.14 | 0.78 | TRUE |