Best TWAS P=1.56e-07 · Best GWAS P=3.58e-07 conditioned to 0.177
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Pancreas | SYNM | 0.22 | 0.14 | enet | 7 | 0.19 | 1.3e-08 | 5 | 5.2 | 1.8e-07 | 0.84 | 0 | 0.99 | FALSE |
2 | GTEx | Pancreas | RP11-6O2.4 | 0.20 | 0.14 | enet | 10 | 0.18 | 4.8e-08 | 5 | 5.2 | 1.6e-07 | 0.82 | 0 | 0.99 | TRUE |