TWAS
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Pulse rate, automated reading
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chr6:53,184,508-54,821,152
Best TWAS P=9.79e-12 · Best GWAS P=1.71e-13 conditioned to 0.00161
53.2M
53.4M
53.6M
53.8M
54M
54.2M
54.4M
54.6M
54.8M
0
5
10
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
The Cancer Genome Atlas
Bladder Urothelial Carcinoma
C6orf142
0.06
0.01
blup
181
0.02
1.0e-02
-6.4
6.8
9.8e-12
-0.81
0.02
0.63
TRUE
4
The Cancer Genome Atlas
Esophageal Carcinoma
C6orf142
0.27
0.01
blup
184
0.08
1.3e-03
-7.1
6.4
1.5e-10
-0.77
0.02
0.52
FALSE
1
CommonMind
Brain Pre-frontal Cortex
MLIP
0.14
0.06
enet
16
0.11
1.1e-13
-6.4
5.4
7.4e-08
-0.65
0.74
0.26
FALSE
2
ROSMAP
Brain Pre-frontal Cortex
MLIP
0.08
0.00
bslmm
635
0.03
3.1e-05
-6.3
5.3
9.9e-08
-0.61
0.10
0.82
FALSE