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chr9:122,669,622-124,303,632

Best TWAS P=9.84e-10 · Best GWAS P=1.46e-09 conditioned to 0.37

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
4	GTEx	Heart Atrial Appendage	RP11-27I1.4	0.09	0.09	lasso	5	0.06	1.1e-03	-6.0	-6.1	9.8e-10	0.94	0.01	0.96	TRUE
7	GTEx	Skin Sun Exposed Lower leg	PSMD5	0.04	0.04	lasso	6	0.03	3.1e-03	-5.7	-5.9	3.1e-09	0.82	0.02	0.96	FALSE
13	The Cancer Genome Atlas	Lung Adenocarcinoma	MEGF9	0.02	0.03	blup	51	0.02	2.4e-03	-5.6	-5.8	8.3e-09	0.82	0.02	0.88	FALSE
2	GTEx	Adipose Visceral Omentum	MEGF9	0.10	0.08	enet	8	0.07	1.6e-04	-5.7	-5.7	1.3e-08	0.83	0.03	0.95	FALSE
3	GTEx	Breast Mammary Tissue	MEGF9	0.10	0.04	enet	15	0.05	9.1e-04	-5.7	-5.6	2.1e-08	0.80	0.02	0.98	FALSE
8	GTEx	Skin Sun Exposed Lower leg	MEGF9	0.11	0.10	lasso	5	0.12	2.7e-10	-5.5	-5.6	2.3e-08	0.81	0.03	0.97	FALSE
9	METSIM	Adipose	MEGF9	0.14	0.18	bslmm	372	0.19	4.7e-27	-5.6	-5.5	5.0e-08	0.79	0.03	0.97	FALSE
1	GTEx	Adipose Subcutaneous	MEGF9	0.19	0.18	lasso	6	0.18	6.7e-15	-5.7	-5.4	5.9e-08	0.78	0.03	0.97	FALSE
12	The Cancer Genome Atlas	Brain Lower Grade Glioma	PSMD5	0.24	0.24	enet	19	0.25	1.1e-27	-5.0	-5.3	9.2e-08	0.62	0.00	1.00	FALSE
5	GTEx	Liver	PSMD5	0.30	0.22	enet	18	0.24	2.1e-07	-4.2	-5.3	9.6e-08	0.69	0.04	0.96	FALSE
10	YFS	Blood	MEGF9	0.13	0.19	lasso	12	0.20	2.9e-64	-5.4	5.2	1.5e-07	-0.74	0.09	0.91	FALSE
6	GTEx	Muscle Skeletal	PSMD5	0.31	0.31	enet	20	0.34	6.0e-34	-5.0	-5.2	2.5e-07	0.59	0.38	0.62	FALSE
14	The Cancer Genome Atlas	Uterine Corpus Endometrial Carcinoma	LOC253039	0.24	0.26	lasso	2	0.23	5.7e-07	-5.0	-5.2	2.5e-07	0.61	0.00	0.99	FALSE
11	The Cancer Genome Atlas	Brain Lower Grade Glioma	LOC253039	0.63	0.64	enet	11	0.66	1.6e-99	-5.0	-5.2	2.7e-07	0.61	0.00	0.99	FALSE