[Hub]/) : Traits : Comparative height size at age 10 : ← →

chr3:37,332,662-38,766,338

Best TWAS P=6.76e-10 · Best GWAS P=1.31e-08 conditioned to 0.486

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
6	GTEx	Brain Nucleus accumbens basal ganglia	VILL	0.31	0.13	lasso	6	0.12	5.2e-04	5.3	-6.2	6.8e-10	-0.86	0.02	0.93	TRUE
5	GTEx	Brain Frontal Cortex BA9	VILL	0.31	0.30	enet	11	0.34	7.9e-10	5.4	-5.7	1.6e-08	-0.86	0.02	0.98	FALSE
4	GTEx	Brain Cortex	VILL	0.33	0.29	lasso	2	0.25	1.8e-07	5.5	-5.6	2.0e-08	-0.89	0.02	0.98	FALSE
8	ROSMAP	Brain Pre-frontal Cortex	PLCD1	0.13	0.12	bslmm	421	0.12	6.6e-15	5.5	-5.6	2.4e-08	-0.80	0.02	0.98	FALSE
3	GTEx	Brain Caudate basal ganglia	VILL	0.35	0.38	lasso	8	0.33	3.9e-10	5.3	-5.6	2.5e-08	-0.97	0.02	0.98	FALSE
9	YFS	Blood	PLCD1	0.07	0.08	enet	15	0.08	8.0e-25	5.5	5.6	2.5e-08	0.85	0.02	0.98	FALSE
1	CommonMind	Brain Pre-frontal Cortex	PLCD1	0.07	0.02	lasso	4	0.03	4.2e-04	3.5	5.5	4.2e-08	0.73	0.03	0.92	FALSE
2	CommonMind	Brain Pre-frontal Cortex	VILL	0.26	0.38	lasso	3	0.38	1.9e-49	5.2	-5.4	6.5e-08	-0.99	0.05	0.95	FALSE
10	The Cancer Genome Atlas	Breast Invasive Carcinoma	PLCD1	0.01	0.02	blup	55	0.01	7.3e-03	5.2	5.3	8.8e-08	0.88	0.02	0.89	FALSE
11	The Cancer Genome Atlas	Brain Lower Grade Glioma	VILL	0.03	0.01	blup	52	0.01	1.5e-02	5.4	-5.3	1.1e-07	-0.73	0.01	0.67	FALSE
12	The Cancer Genome Atlas	Prostate Adenocarcinoma	PLCD1	0.05	0.04	enet	8	0.04	6.3e-05	5.2	5.3	1.2e-07	0.81	0.02	0.98	FALSE
7	ROSMAP	Brain Pre-frontal Cortex	VILL	0.34	0.46	lasso	3	0.46	3.1e-65	5.2	-5.3	1.3e-07	-0.96	0.06	0.94	FALSE