Best TWAS P=4.87e-09 · Best GWAS P=1.13e-12 conditioned to 2.25e-05
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Brain Cerebellum | CEP41 | 0.24 | 0.13 | enet | 20 | 0.13 | 0.00015 | 4.2 | 5.7 | 9.4e-09 | -0.04 | 0.16 | 0.07 | TRUE |
2 | The Cancer Genome Atlas | Thyroid Carcinoma | ZC3HC1 | 0.04 | 0.01 | blup | 48 | 0.02 | 0.00814 | 5.2 | 5.9 | 4.9e-09 | -0.59 | 0.02 | 0.19 | TRUE |