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chr19:48,464,978-49,872,085

Best TWAS P=1.67e-08 · Best GWAS P=1.11e-08 conditioned to 0.13

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
11	The Cancer Genome Atlas	Thyroid Carcinoma	NTN5	0.11	0.07	blup	43	0.09	2.6e-09	5.3	5.6	1.7e-08	0.89	0.01	0.99	TRUE
7	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	FUT2	0.05	0.08	lasso	2	0.08	6.7e-09	5.6	-5.6	2.1e-08	-0.99	0.01	0.99	FALSE
1	METSIM	Adipose	NTN5	0.13	0.10	bslmm	450	0.14	3.2e-20	5.3	5.4	5.7e-08	0.69	0.04	0.96	FALSE
2	The Cancer Genome Atlas	Breast Invasive Carcinoma	NTN5	0.02	0.01	enet	11	0.01	7.6e-04	5.3	5.4	7.4e-08	0.85	0.01	0.92	FALSE
3	The Cancer Genome Atlas	Colon Adenocarcinoma	FUT2	0.18	0.22	enet	12	0.18	6.8e-11	5.6	-5.3	8.9e-08	-0.97	0.01	0.99	FALSE
6	The Cancer Genome Atlas	Brain Lower Grade Glioma	NTN5	0.05	0.04	lasso	2	0.02	6.7e-04	5.3	5.3	1.0e-07	0.97	0.01	0.99	FALSE
4	The Cancer Genome Atlas	Colon Adenocarcinoma	SEC1	0.05	0.04	enet	11	0.01	8.5e-02	5.5	-5.3	1.1e-07	-0.93	0.01	0.90	FALSE
10	The Cancer Genome Atlas	Stomach Adenocarcinoma	FUT2	0.14	0.16	lasso	8	0.14	4.9e-10	5.3	-5.3	1.3e-07	-0.96	0.02	0.98	FALSE
8	The Cancer Genome Atlas	Pancreatic Adenocarcinoma	FUT2	0.08	0.12	lasso	4	0.11	2.5e-05	5.3	-5.3	1.4e-07	-0.95	0.02	0.96	FALSE
5	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	FUT2	0.10	0.01	blup	51	0.05	9.8e-04	5.6	-5.2	1.9e-07	-0.89	0.01	0.94	FALSE
9	The Cancer Genome Atlas	Rectum Adenocarcinoma	FUT2	0.26	0.28	lasso	10	0.22	5.2e-06	5.3	-5.1	3.0e-07	-0.96	0.02	0.97	FALSE