Best TWAS P=7.86e-10 · Best GWAS P=3.07e-11 conditioned to 0.0114
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Skin Not Sun Exposed Suprapubic | KIF5A | 0.13 | 0.00 | enet | 9 | 0.03 | 0.0067 | -6.6 | -5.8 | 6.6e-09 | 0.88 | 0.01 | 0.98 | FALSE |
2 | The Cancer Genome Atlas | Brain Lower Grade Glioma | INHBC | 0.03 | 0.03 | lasso | 3 | 0.02 | 0.0016 | -6.6 | 6.1 | 7.9e-10 | -0.94 | 0.00 | 0.98 | TRUE |