Best TWAS P=6.23e-25 · Best GWAS P=3.97e-25 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NTR | Blood | BACH2 | 0.03 | 0.02 | lasso | 3 | 0.02 | 2.1e-06 | 10.4 | -10.3 | 6.2e-25 | -1.00 | 0.00 | 1.00 | TRUE |
2 | YFS | Blood | BACH2 | 0.03 | 0.01 | lasso | 4 | 0.01 | 6.9e-04 | 5.5 | -7.3 | 3.2e-13 | -0.46 | 0.45 | 0.46 | FALSE |