Best TWAS P=1.06e-13 · Best GWAS P=2.04e-15 conditioned to 0.00027
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | SLC1A2 | 0.03 | 0 | blup | 180 | 0.01 | 0.053 | 5.5 | -7.4 | 1.1e-13 | -0.74 | 0.03 | 0.5 | TRUE |