Best TWAS P=7.36e-08 · Best GWAS P=8.44e-19 conditioned to 3.73e-15
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | NAB1 | 0.06 | 0.06 | lasso | 2 | 0.04 | 4.3e-06 | 5.0 | -5.4 | 7.4e-08 | -0.22 | 0.97 | 0.00 | TRUE |
2 | GTEx | Testis | NAB1 | 0.14 | 0.06 | enet | 20 | 0.10 | 5.1e-05 | 3.8 | 5.4 | 8.5e-08 | 0.25 | 0.73 | 0.03 | FALSE |