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Medication: Levothyroxine sodium
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chr3:11,350,553-12,928,762
Best TWAS P=1.65e-08 · Best GWAS P=1.04e-07 conditioned to 1
11.4M
11.6M
11.8M
12M
12.2M
12.4M
12.6M
12.8M
13M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Brain Hypothalamus
TIMP4
0.24
0.10
lasso
4
0.11
1.7e-03
5.3
5.6
1.6e-08
0.97
0.02
0.95
TRUE
4
The Cancer Genome Atlas
Lung Adenocarcinoma
SYN2
0.03
0.02
enet
6
0.02
4.0e-03
5.3
5.6
2.1e-08
0.90
0.01
0.96
FALSE
3
ROSMAP
Brain Pre-frontal Cortex
TIMP4
0.07
0.05
lasso
7
0.06
5.5e-08
4.4
5.3
1.4e-07
0.90
0.05
0.95
FALSE
2
GTEx
Esophagus Gastroesophageal Junction
SYN2
0.23
0.09
lasso
4
0.12
3.3e-05
4.4
5.1
2.9e-07
0.93
0.03
0.96
FALSE