Best TWAS P=1.75e-07 · Best GWAS P=2.06e-08 conditioned to 0.041
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Aorta | SLC4A7 | 0.10 | 0.08 | enet | 15 | 0.08 | 5.4e-05 | -5.6 | -5.2 | 1.7e-07 | 0.92 | 0 | 0.99 | TRUE |
2 | GTEx | Cells Transformed fibroblasts | SLC4A7 | 0.15 | 0.02 | enet | 21 | 0.04 | 4.0e-04 | -5.6 | -5.2 | 2.5e-07 | 0.80 | 0 | 0.99 | FALSE |