Best TWAS P=3.87e-10 · Best GWAS P=1.3e-11 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Adipose Subcutaneous | GPR126 | 0.06 | 0.04 | lasso | 4 | 0.04 | 0.00061 | -6.4 | 6.3 | 3.9e-10 | -0.97 | 0.02 | 0.96 | TRUE |
2 | METSIM | Adipose | GPR126 | 0.05 | 0.01 | blup | 429 | 0.02 | 0.00019 | -3.6 | 5.6 | 1.7e-08 | -0.74 | 0.10 | 0.89 | FALSE |