Best TWAS P=2.06e-07 · Best GWAS P=1.68e-06 conditioned to 0.365
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Spleen | COG5 | 0.22 | 0.06 | lasso | 5 | 0.12 | 0.00074 | 4.5 | 5.2 | 2.1e-07 | 0.82 | 0.05 | 0.82 | TRUE |
| 2 | NTR | Blood | HBP1 | 0.01 | 0.00 | bslmm | 352 | 0.00 | 0.04230 | 4.3 | 5.2 | 2.4e-07 | 0.84 | 0.04 | 0.74 | FALSE |