Best TWAS P=1.01e-09 · Best GWAS P=5.1e-10 conditioned to 0.0464
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Glioblastoma Multiforme | EPHX2 | 0.15 | 0.12 | lasso | 7 | 0.12 | 0.0002 | -5.9 | -5.1 | 3e-07 | 0.77 | 0.04 | 0.82 | TRUE |
| 2 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CLU | 0.04 | 0.00 | blup | 66 | 0.01 | 0.0106 | -4.0 | 6.1 | 1e-09 | -0.63 | 0.01 | 0.60 | TRUE |