Best TWAS P=3.29e-08 · Best GWAS P=2.8e-09 conditioned to 1.49e-06
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Adrenal Gland | NOSTRIN | 0.21 | 0.09 | lasso | 4 | 0.09 | 4.1e-04 | 5.5 | 5.5 | 3.3e-08 | 0.23 | 0.09 | 0.83 | TRUE |
2 | The Cancer Genome Atlas | Breast Invasive Carcinoma | NOSTRIN | 0.03 | 0.01 | blup | 55 | 0.02 | 9.5e-05 | -4.7 | 5.4 | 8.5e-08 | 0.24 | 0.03 | 0.91 | FALSE |
3 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | NOSTRIN | 0.12 | 0.13 | lasso | 7 | 0.14 | 4.5e-15 | -4.7 | 5.2 | 1.5e-07 | 0.20 | 0.04 | 0.95 | FALSE |