Best TWAS P=7.19e-12 · Best GWAS P=3.36e-11 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | GPX1 | 0.12 | 0.19 | blup | 275 | 0.19 | 1.3e-22 | 6.3 | 6.2 | 5.8e-10 | 0.94 | 0.09 | 0.91 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | RHOA | 0.03 | 0.02 | blup | 294 | 0.02 | 1.0e-03 | 6.3 | 6.2 | 4.0e-10 | 0.91 | 0.04 | 0.93 | FALSE |
3 | GTEx | Adipose Subcutaneous | AMT | 0.24 | 0.26 | enet | 23 | 0.29 | 1.5e-23 | 6.2 | -6.5 | 6.2e-11 | -0.98 | 0.08 | 0.92 | FALSE |
4 | GTEx | Adipose Subcutaneous | TCTA | 0.05 | 0.01 | enet | 10 | 0.01 | 5.8e-02 | 6.6 | -6.1 | 1.3e-09 | -0.89 | 0.03 | 0.85 | FALSE |
5 | GTEx | Adipose Subcutaneous | NICN1 | 0.20 | 0.12 | lasso | 17 | 0.13 | 6.7e-11 | 6.2 | -6.1 | 1.4e-09 | -0.91 | 0.07 | 0.93 | FALSE |
6 | GTEx | Adipose Subcutaneous | KLHDC8B | 0.04 | 0.01 | lasso | 5 | 0.00 | 1.3e-01 | 6.4 | 6.4 | 1.3e-10 | 0.91 | 0.06 | 0.85 | FALSE |
7 | GTEx | Adipose Subcutaneous | NICN1-AS1 | 0.16 | 0.14 | enet | 20 | 0.14 | 2.4e-11 | 6.2 | -6.0 | 1.7e-09 | -0.93 | 0.10 | 0.90 | FALSE |
8 | GTEx | Adipose Visceral Omentum | AMT | 0.21 | 0.23 | lasso | 5 | 0.21 | 5.1e-11 | 6.2 | -6.4 | 1.3e-10 | -0.97 | 0.06 | 0.94 | FALSE |
9 | GTEx | Adipose Visceral Omentum | NICN1 | 0.09 | 0.06 | lasso | 4 | 0.04 | 4.1e-03 | 6.6 | -6.6 | 3.6e-11 | -1.00 | 0.04 | 0.94 | FALSE |
10 | GTEx | Adipose Visceral Omentum | LAMB2 | 0.05 | 0.00 | lasso | 5 | 0.00 | 7.0e-01 | 4.8 | 5.3 | 1.1e-07 | 0.80 | 0.12 | 0.38 | FALSE |
11 | GTEx | Artery Aorta | AMT | 0.25 | 0.37 | enet | 29 | 0.40 | 2.1e-23 | 6.2 | -6.4 | 1.6e-10 | -0.98 | 0.05 | 0.95 | FALSE |
12 | GTEx | Artery Aorta | NICN1 | 0.15 | 0.21 | enet | 28 | 0.21 | 1.4e-11 | 6.5 | -6.2 | 5.5e-10 | -0.96 | 0.04 | 0.96 | FALSE |
13 | GTEx | Artery Aorta | NICN1-AS1 | 0.14 | 0.17 | lasso | 17 | 0.16 | 6.9e-09 | 6.2 | -6.3 | 3.7e-10 | -0.97 | 0.06 | 0.94 | FALSE |
14 | GTEx | Artery Coronary | AMT | 0.14 | 0.12 | lasso | 9 | 0.12 | 6.0e-05 | 6.2 | -6.1 | 1.1e-09 | -0.93 | 0.07 | 0.89 | FALSE |
15 | GTEx | Artery Coronary | NICN1 | 0.10 | 0.01 | lasso | 13 | 0.01 | 1.3e-01 | 6.2 | -6.0 | 2.4e-09 | -0.91 | 0.05 | 0.67 | FALSE |
16 | GTEx | Artery Coronary | DALRD3 | 0.19 | 0.14 | lasso | 2 | 0.12 | 1.1e-04 | 6.2 | -6.2 | 4.4e-10 | -0.96 | 0.03 | 0.96 | FALSE |
17 | GTEx | Artery Tibial | AMT | 0.25 | 0.30 | lasso | 9 | 0.34 | 5.2e-27 | 6.2 | -5.6 | 2.4e-08 | -0.92 | 0.14 | 0.86 | FALSE |
18 | GTEx | Artery Tibial | TCTA | 0.04 | 0.04 | lasso | 1 | 0.03 | 1.6e-03 | 6.2 | -6.2 | 4.5e-10 | -0.96 | 0.06 | 0.84 | FALSE |
19 | GTEx | Brain Caudate basal ganglia | AMT | 0.18 | 0.14 | enet | 24 | 0.15 | 3.6e-05 | 6.2 | -6.0 | 1.6e-09 | -0.95 | 0.05 | 0.94 | FALSE |
20 | GTEx | Brain Caudate basal ganglia | GPX1 | 0.15 | 0.10 | lasso | 14 | 0.06 | 9.5e-03 | 6.6 | 6.5 | 8.2e-11 | 0.99 | 0.03 | 0.91 | FALSE |
21 | GTEx | Brain Cerebellar Hemisphere | AMT | 0.40 | 0.42 | enet | 23 | 0.42 | 4.1e-12 | 6.2 | -6.4 | 1.6e-10 | -0.93 | 0.05 | 0.95 | FALSE |
22 | GTEx | Brain Cerebellum | AMT | 0.37 | 0.36 | lasso | 18 | 0.34 | 8.2e-11 | 6.3 | -6.4 | 1.3e-10 | -0.95 | 0.06 | 0.94 | FALSE |
23 | GTEx | Brain Cortex | AMT | 0.11 | 0.05 | lasso | 10 | 0.07 | 6.5e-03 | 6.2 | -5.5 | 3.0e-08 | -0.91 | 0.06 | 0.57 | FALSE |
24 | GTEx | Brain Cortex | NCKIPSD | 0.15 | 0.07 | enet | 16 | 0.11 | 5.5e-04 | 6.1 | -5.3 | 1.4e-07 | -0.71 | 0.10 | 0.83 | FALSE |
25 | GTEx | Brain Frontal Cortex BA9 | AMT | 0.25 | 0.05 | enet | 17 | 0.13 | 2.1e-04 | 6.2 | -6.0 | 1.9e-09 | -0.89 | 0.09 | 0.66 | FALSE |
26 | GTEx | Brain Frontal Cortex BA9 | CCDC71 | 0.28 | 0.17 | enet | 18 | 0.21 | 3.1e-06 | 6.1 | 5.9 | 3.9e-09 | 0.70 | 0.13 | 0.79 | FALSE |
27 | GTEx | Brain Frontal Cortex BA9 | WDR6 | 0.08 | 0.04 | lasso | 5 | 0.04 | 3.0e-02 | 6.1 | 5.2 | 1.9e-07 | 0.64 | 0.10 | 0.20 | FALSE |
28 | GTEx | Brain Hippocampus | AMT | 0.16 | 0.13 | lasso | 9 | 0.11 | 1.5e-03 | 6.6 | -6.6 | 5.1e-11 | -0.99 | 0.04 | 0.82 | FALSE |
29 | GTEx | Brain Hypothalamus | P4HTM | 0.12 | 0.04 | lasso | 8 | 0.02 | 1.3e-01 | 5.1 | -5.6 | 2.2e-08 | -0.90 | 0.05 | 0.58 | FALSE |
30 | GTEx | Brain Nucleus accumbens basal ganglia | NICN1 | 0.16 | 0.10 | lasso | 10 | 0.09 | 2.7e-03 | 6.6 | 6.4 | 1.9e-10 | 0.99 | 0.06 | 0.76 | FALSE |
31 | GTEx | Brain Putamen basal ganglia | AMT | 0.11 | 0.03 | lasso | 14 | 0.05 | 2.4e-02 | 6.6 | -6.4 | 1.4e-10 | -0.94 | 0.04 | 0.64 | FALSE |
32 | GTEx | Brain Putamen basal ganglia | NCKIPSD | 0.23 | 0.23 | enet | 14 | 0.22 | 5.4e-06 | 4.4 | -5.3 | 9.4e-08 | -0.76 | 0.11 | 0.84 | FALSE |
33 | GTEx | Breast Mammary Tissue | AMT | 0.15 | 0.22 | enet | 26 | 0.25 | 3.7e-13 | 6.6 | -6.2 | 5.0e-10 | -0.97 | 0.04 | 0.96 | FALSE |
34 | GTEx | Breast Mammary Tissue | NICN1 | 0.08 | 0.08 | lasso | 4 | 0.08 | 5.2e-05 | 6.6 | -6.6 | 3.1e-11 | -0.99 | 0.04 | 0.96 | FALSE |
35 | GTEx | Breast Mammary Tissue | NICN1-AS1 | 0.07 | 0.08 | lasso | 5 | 0.05 | 1.6e-03 | 6.6 | -6.6 | 4.5e-11 | -1.00 | 0.05 | 0.94 | FALSE |
36 | GTEx | Breast Mammary Tissue (Female) | AMT | 0.10 | 0.12 | lasso | 5 | 0.10 | 8.7e-04 | 6.2 | -6.4 | 2.0e-10 | -0.99 | 0.05 | 0.87 | FALSE |
37 | GTEx | Cells EBV-transformed lymphocytes | USP4 | 0.08 | 0.05 | lasso | 2 | 0.09 | 8.7e-04 | 6.6 | 6.1 | 1.2e-09 | 0.90 | 0.07 | 0.76 | FALSE |
38 | GTEx | Cells EBV-transformed lymphocytes | CCDC71 | 0.19 | 0.10 | lasso | 9 | 0.07 | 3.3e-03 | 6.1 | 5.4 | 5.2e-08 | 0.69 | 0.19 | 0.42 | FALSE |
39 | GTEx | Cells EBV-transformed lymphocytes | KLHDC8B | 0.08 | 0.12 | enet | 13 | 0.10 | 3.0e-04 | 6.4 | 5.9 | 4.0e-09 | 0.92 | 0.08 | 0.80 | FALSE |
40 | GTEx | Cells Transformed fibroblasts | AMT | 0.16 | 0.24 | lasso | 8 | 0.24 | 4.4e-18 | 6.2 | -6.3 | 2.3e-10 | -0.98 | 0.08 | 0.92 | FALSE |
41 | GTEx | Cells Transformed fibroblasts | NICN1 | 0.06 | 0.06 | lasso | 7 | 0.05 | 1.6e-04 | 6.6 | -6.8 | 1.0e-11 | -0.97 | 0.06 | 0.93 | FALSE |
42 | GTEx | Cells Transformed fibroblasts | KLHDC8B | 0.07 | 0.07 | lasso | 13 | 0.08 | 2.2e-06 | 6.4 | 6.5 | 1.1e-10 | 0.97 | 0.08 | 0.92 | FALSE |
43 | GTEx | Cells Transformed fibroblasts | GPX1 | 0.07 | 0.10 | lasso | 5 | 0.10 | 1.2e-07 | 6.3 | 6.1 | 1.1e-09 | 0.94 | 0.09 | 0.91 | FALSE |
44 | GTEx | Cells Transformed fibroblasts | NICN1-AS1 | 0.05 | 0.05 | enet | 21 | 0.05 | 6.7e-05 | 6.2 | -6.5 | 9.3e-11 | -0.98 | 0.07 | 0.93 | FALSE |
45 | GTEx | Colon Sigmoid | AMT | 0.16 | 0.17 | lasso | 15 | 0.13 | 3.3e-05 | 6.2 | -6.0 | 2.6e-09 | -0.94 | 0.06 | 0.94 | FALSE |
46 | GTEx | Colon Sigmoid | KLHDC8B | 0.09 | 0.03 | lasso | 6 | 0.01 | 1.2e-01 | 6.4 | 6.2 | 4.4e-10 | 0.95 | 0.04 | 0.67 | FALSE |
47 | GTEx | Colon Sigmoid | GPX1 | 0.12 | 0.07 | enet | 24 | 0.09 | 6.2e-04 | 4.6 | 5.3 | 1.4e-07 | 0.76 | 0.20 | 0.71 | FALSE |
48 | GTEx | Colon Transverse | AMT | 0.11 | 0.18 | lasso | 7 | 0.18 | 8.7e-09 | 6.2 | -6.2 | 4.3e-10 | -0.95 | 0.11 | 0.89 | FALSE |
49 | GTEx | Colon Transverse | NICN1 | 0.07 | 0.08 | lasso | 2 | 0.08 | 1.8e-04 | 6.5 | -6.5 | 7.6e-11 | -0.99 | 0.04 | 0.92 | FALSE |
50 | GTEx | Colon Transverse | NICN1-AS1 | 0.06 | 0.06 | lasso | 5 | 0.06 | 1.0e-03 | 6.6 | -6.1 | 9.6e-10 | -0.98 | 0.04 | 0.92 | FALSE |
51 | GTEx | Esophagus Gastroesophageal Junction | AMT | 0.14 | 0.15 | lasso | 12 | 0.15 | 3.6e-06 | 6.2 | -6.4 | 1.4e-10 | -0.98 | 0.06 | 0.94 | FALSE |
52 | GTEx | Esophagus Gastroesophageal Junction | RP13-131K19.6 | 0.08 | 0.07 | lasso | 2 | 0.07 | 2.2e-03 | 4.8 | 5.3 | 1.2e-07 | 0.81 | 0.16 | 0.56 | FALSE |
53 | GTEx | Esophagus Mucosa | AMT | 0.13 | 0.19 | lasso | 9 | 0.18 | 2.5e-12 | 6.2 | -6.2 | 5.9e-10 | -0.96 | 0.13 | 0.87 | FALSE |
54 | GTEx | Esophagus Mucosa | NICN1 | 0.08 | 0.07 | lasso | 5 | 0.05 | 1.8e-04 | 6.2 | -6.4 | 1.7e-10 | -0.98 | 0.05 | 0.95 | FALSE |
55 | GTEx | Esophagus Mucosa | QRICH1 | 0.07 | 0.07 | enet | 15 | 0.06 | 3.9e-05 | 4.8 | 5.1 | 2.9e-07 | 0.87 | 0.20 | 0.78 | FALSE |
56 | GTEx | Esophagus Mucosa | GPX1 | 0.04 | 0.02 | enet | 18 | 0.02 | 2.0e-02 | 5.7 | 6.0 | 2.5e-09 | 0.83 | 0.17 | 0.70 | FALSE |
57 | GTEx | Esophagus Mucosa | NICN1-AS1 | 0.08 | 0.06 | enet | 20 | 0.05 | 3.6e-04 | 6.2 | -5.7 | 9.7e-09 | -0.87 | 0.10 | 0.89 | FALSE |
58 | GTEx | Esophagus Muscularis | AMT | 0.13 | 0.18 | lasso | 5 | 0.20 | 2.1e-12 | 6.2 | -6.1 | 1.1e-09 | -0.93 | 0.12 | 0.88 | FALSE |
59 | GTEx | Esophagus Muscularis | QRICH1 | 0.06 | 0.06 | lasso | 10 | 0.05 | 7.7e-04 | 4.9 | 5.5 | 3.1e-08 | 0.91 | 0.07 | 0.92 | FALSE |
60 | GTEx | Heart Atrial Appendage | QRICH1 | 0.06 | 0.01 | enet | 7 | 0.01 | 1.2e-01 | 4.9 | 5.3 | 1.5e-07 | 0.83 | 0.09 | 0.62 | FALSE |
61 | GTEx | Heart Left Ventricle | DAG1 | 0.06 | 0.02 | enet | 14 | 0.02 | 3.2e-02 | 4.6 | -5.4 | 7.7e-08 | -0.77 | 0.11 | 0.72 | FALSE |
62 | GTEx | Liver | WDR6 | 0.11 | 0.01 | enet | 15 | 0.03 | 4.7e-02 | 4.6 | 5.5 | 3.4e-08 | 0.79 | 0.11 | 0.45 | FALSE |
63 | GTEx | Lung | AMT | 0.20 | 0.31 | lasso | 14 | 0.30 | 4.2e-23 | 6.2 | -6.4 | 2.0e-10 | -0.98 | 0.10 | 0.90 | FALSE |
64 | GTEx | Lung | NICN1 | 0.12 | 0.12 | enet | 13 | 0.15 | 2.6e-11 | 6.6 | -6.4 | 1.6e-10 | -0.96 | 0.04 | 0.96 | FALSE |
65 | GTEx | Lung | QRICH1 | 0.07 | 0.10 | lasso | 2 | 0.10 | 8.1e-08 | 6.5 | 6.3 | 2.2e-10 | 0.98 | 0.03 | 0.97 | FALSE |
66 | GTEx | Lung | NICN1-AS1 | 0.12 | 0.12 | lasso | 8 | 0.12 | 1.0e-09 | 6.3 | -6.1 | 1.2e-09 | -0.95 | 0.04 | 0.96 | FALSE |
67 | GTEx | Muscle Skeletal | AMT | 0.21 | 0.11 | lasso | 12 | 0.13 | 1.8e-12 | 6.2 | -6.3 | 3.5e-10 | -0.96 | 0.13 | 0.87 | FALSE |
68 | GTEx | Muscle Skeletal | NICN1 | 0.05 | 0.06 | lasso | 1 | 0.06 | 2.7e-06 | 6.3 | -6.3 | 3.9e-10 | -0.97 | 0.06 | 0.94 | FALSE |
69 | GTEx | Muscle Skeletal | NICN1-AS1 | 0.05 | 0.07 | lasso | 1 | 0.06 | 8.6e-07 | 6.3 | -6.3 | 3.9e-10 | -0.97 | 0.08 | 0.92 | FALSE |
70 | GTEx | Nerve Tibial | AMT | 0.20 | 0.32 | enet | 23 | 0.33 | 6.4e-24 | 6.2 | -6.4 | 1.4e-10 | -0.98 | 0.12 | 0.88 | FALSE |
71 | GTEx | Nerve Tibial | NICN1 | 0.13 | 0.15 | enet | 21 | 0.16 | 1.4e-11 | 6.2 | -6.1 | 1.4e-09 | -0.90 | 0.08 | 0.92 | FALSE |
72 | GTEx | Nerve Tibial | QRICH1 | 0.07 | 0.06 | lasso | 6 | 0.08 | 3.0e-06 | 4.9 | 5.2 | 2.0e-07 | 0.82 | 0.46 | 0.53 | FALSE |
73 | GTEx | Nerve Tibial | GPX1 | 0.05 | 0.01 | enet | 14 | 0.04 | 9.0e-04 | 4.6 | 5.8 | 8.2e-09 | 0.85 | 0.12 | 0.48 | FALSE |
74 | GTEx | Nerve Tibial | NICN1-AS1 | 0.15 | 0.11 | lasso | 5 | 0.13 | 1.1e-09 | 6.2 | -5.7 | 1.4e-08 | -0.83 | 0.11 | 0.89 | FALSE |
75 | GTEx | Ovary | AMT | 0.22 | 0.18 | lasso | 3 | 0.23 | 2.1e-06 | 6.2 | -6.4 | 1.5e-10 | -0.98 | 0.07 | 0.93 | FALSE |
76 | GTEx | Ovary | NICN1 | 0.14 | 0.07 | lasso | 9 | 0.06 | 1.5e-02 | 4.9 | -5.2 | 1.6e-07 | -0.87 | 0.06 | 0.56 | FALSE |
77 | GTEx | Ovary | NICN1-AS1 | 0.17 | 0.11 | lasso | 3 | 0.10 | 2.1e-03 | 6.2 | -6.0 | 2.7e-09 | -0.94 | 0.07 | 0.80 | FALSE |
78 | GTEx | Pancreas | DALRD3 | 0.26 | 0.13 | lasso | 8 | 0.14 | 1.7e-06 | 4.4 | -5.1 | 3.0e-07 | -0.68 | 0.81 | 0.18 | FALSE |
79 | GTEx | Pituitary | AMT | 0.16 | 0.27 | lasso | 1 | 0.25 | 4.7e-07 | 6.3 | -6.3 | 3.3e-10 | -0.96 | 0.08 | 0.90 | FALSE |
80 | GTEx | Pituitary | ARIH2 | 0.19 | 0.13 | lasso | 7 | 0.13 | 3.1e-04 | 4.4 | -5.5 | 2.8e-08 | -0.76 | 0.37 | 0.44 | FALSE |
81 | GTEx | Pituitary | QRICH1 | 0.28 | 0.05 | lasso | 11 | 0.10 | 1.5e-03 | 6.2 | 5.6 | 2.3e-08 | 0.85 | 0.11 | 0.74 | FALSE |
82 | GTEx | Prostate | AMT | 0.16 | 0.12 | lasso | 9 | 0.08 | 3.9e-03 | 6.1 | -6.4 | 1.6e-10 | -0.84 | 0.08 | 0.80 | FALSE |
83 | GTEx | Skin Not Sun Exposed Suprapubic | AMT | 0.14 | 0.20 | lasso | 5 | 0.22 | 3.0e-12 | 6.2 | -6.3 | 2.7e-10 | -0.98 | 0.06 | 0.94 | FALSE |
84 | GTEx | Skin Not Sun Exposed Suprapubic | NICN1 | 0.07 | 0.09 | lasso | 6 | 0.10 | 4.2e-06 | 6.2 | -6.1 | 8.0e-10 | -0.95 | 0.07 | 0.92 | FALSE |
85 | GTEx | Skin Not Sun Exposed Suprapubic | P4HTM | 0.05 | 0.03 | lasso | 3 | 0.00 | 3.5e-01 | 6.6 | -6.6 | 4.6e-11 | -0.99 | 0.02 | 0.91 | FALSE |
86 | GTEx | Skin Not Sun Exposed Suprapubic | NICN1-AS1 | 0.06 | 0.11 | lasso | 3 | 0.10 | 4.3e-06 | 6.3 | -6.3 | 3.6e-10 | -0.96 | 0.06 | 0.94 | FALSE |
87 | GTEx | Skin Sun Exposed Lower leg | AMT | 0.18 | 0.21 | lasso | 15 | 0.22 | 2.3e-18 | 6.2 | -6.2 | 4.0e-10 | -0.97 | 0.08 | 0.92 | FALSE |
88 | GTEx | Skin Sun Exposed Lower leg | NICN1 | 0.07 | 0.09 | lasso | 10 | 0.08 | 5.6e-07 | 6.2 | -6.2 | 4.8e-10 | -0.96 | 0.07 | 0.93 | FALSE |
89 | GTEx | Skin Sun Exposed Lower leg | KLHDC8B | 0.06 | 0.08 | enet | 21 | 0.06 | 5.6e-06 | 6.2 | 6.4 | 1.7e-10 | 0.92 | 0.06 | 0.94 | FALSE |
90 | GTEx | Skin Sun Exposed Lower leg | QRICH1 | 0.05 | 0.06 | lasso | 3 | 0.07 | 1.1e-06 | 4.1 | 5.4 | 8.1e-08 | 0.92 | 0.06 | 0.94 | FALSE |
91 | GTEx | Skin Sun Exposed Lower leg | GPX1 | 0.04 | 0.05 | lasso | 3 | 0.04 | 2.9e-04 | 6.2 | 5.9 | 3.4e-09 | 0.91 | 0.09 | 0.86 | FALSE |
92 | GTEx | Skin Sun Exposed Lower leg | NICN1-AS1 | 0.09 | 0.08 | lasso | 7 | 0.06 | 4.6e-06 | 6.2 | -6.3 | 3.7e-10 | -0.96 | 0.09 | 0.91 | FALSE |
93 | GTEx | Small Intestine Terminal Ileum | QRICH1 | 0.12 | 0.03 | enet | 22 | 0.05 | 3.0e-02 | 4.8 | 5.5 | 4.1e-08 | 0.76 | 0.07 | 0.53 | FALSE |
94 | GTEx | Spleen | AMT | 0.44 | 0.37 | lasso | 15 | 0.39 | 5.6e-11 | 6.2 | -6.3 | 3.5e-10 | -0.95 | 0.08 | 0.92 | FALSE |
95 | GTEx | Stomach | AMT | 0.13 | 0.14 | enet | 19 | 0.14 | 3.7e-07 | 6.5 | -6.7 | 2.5e-11 | -0.99 | 0.04 | 0.96 | FALSE |
96 | GTEx | Stomach | GPX1 | 0.11 | 0.15 | lasso | 3 | 0.14 | 2.4e-07 | 6.2 | 6.3 | 2.1e-10 | 0.95 | 0.11 | 0.89 | FALSE |
97 | GTEx | Testis | AMT | 0.19 | 0.14 | enet | 25 | 0.20 | 3.7e-09 | 6.6 | -6.5 | 7.9e-11 | -0.89 | 0.04 | 0.96 | FALSE |
98 | GTEx | Thyroid | AMT | 0.26 | 0.36 | enet | 26 | 0.37 | 8.7e-30 | 6.2 | -6.3 | 2.5e-10 | -0.97 | 0.14 | 0.86 | FALSE |
99 | GTEx | Thyroid | TCTA | 0.04 | 0.02 | lasso | 4 | 0.01 | 2.4e-02 | 6.6 | -6.4 | 1.3e-10 | -0.92 | 0.05 | 0.91 | FALSE |
100 | GTEx | Thyroid | NICN1 | 0.27 | 0.33 | lasso | 13 | 0.34 | 5.6e-27 | 6.2 | -6.2 | 5.3e-10 | -0.95 | 0.14 | 0.86 | FALSE |
101 | GTEx | Thyroid | DALRD3 | 0.04 | 0.04 | lasso | 4 | 0.04 | 4.4e-04 | 4.8 | -5.8 | 5.1e-09 | -0.93 | 0.08 | 0.88 | FALSE |
102 | GTEx | Thyroid | WDR6 | 0.03 | 0.02 | lasso | 4 | 0.02 | 1.6e-02 | 6.2 | 5.5 | 4.2e-08 | 0.65 | 0.15 | 0.19 | FALSE |
103 | GTEx | Thyroid | KLHDC8B | 0.09 | 0.07 | enet | 28 | 0.11 | 1.4e-08 | 6.1 | 5.5 | 3.4e-08 | 0.61 | 0.22 | 0.77 | FALSE |
104 | GTEx | Thyroid | GPX1 | 0.10 | 0.12 | enet | 23 | 0.11 | 9.1e-09 | 6.2 | 5.8 | 5.5e-09 | 0.92 | 0.11 | 0.89 | FALSE |
105 | GTEx | Thyroid | NICN1-AS1 | 0.19 | 0.27 | enet | 31 | 0.29 | 1.9e-22 | 6.2 | -6.2 | 7.2e-10 | -0.95 | 0.14 | 0.86 | FALSE |
106 | GTEx | Uterus | AMT | 0.24 | 0.19 | lasso | 11 | 0.18 | 1.4e-04 | 4.8 | -5.6 | 2.1e-08 | -0.91 | 0.06 | 0.83 | FALSE |
107 | GTEx | Uterus | NICN1 | 0.11 | 0.09 | lasso | 3 | 0.07 | 1.6e-02 | 4.9 | -5.6 | 1.9e-08 | -0.91 | 0.05 | 0.62 | FALSE |
108 | GTEx | Vagina | AMT | 0.12 | 0.02 | lasso | 4 | 0.04 | 4.2e-02 | 4.8 | -5.3 | 9.4e-08 | -0.89 | 0.06 | 0.53 | FALSE |
109 | GTEx | Whole Blood | AMT | 0.07 | 0.08 | enet | 37 | 0.09 | 1.1e-08 | 6.2 | -6.3 | 2.1e-10 | -0.92 | 0.12 | 0.88 | FALSE |
110 | GTEx | Whole Blood | GPX1 | 0.05 | 0.06 | enet | 15 | 0.05 | 1.5e-05 | 6.2 | 6.6 | 3.9e-11 | 0.94 | 0.13 | 0.87 | FALSE |
111 | METSIM | Adipose | AMT | 0.10 | 0.21 | lasso | 25 | 0.21 | 2.9e-30 | 6.3 | -6.3 | 2.4e-10 | -0.97 | 0.14 | 0.86 | FALSE |
112 | METSIM | Adipose | QRICH1 | 0.05 | 0.09 | lasso | 5 | 0.09 | 9.8e-13 | 6.2 | 6.1 | 1.1e-09 | 0.96 | 0.06 | 0.94 | FALSE |
113 | NTR | Blood | USP4 | 0.02 | 0.02 | lasso | 5 | 0.02 | 2.5e-07 | 6.6 | 6.8 | 7.2e-12 | 0.95 | 0.04 | 0.96 | TRUE |
114 | ROSMAP | Brain Pre-frontal Cortex | AMT | 0.15 | 0.27 | lasso | 15 | 0.28 | 2.2e-36 | 6.6 | -6.3 | 3.3e-10 | -0.98 | 0.04 | 0.96 | FALSE |
115 | ROSMAP | Brain Pre-frontal Cortex | CCDC71 | 0.07 | 0.07 | lasso | 5 | 0.06 | 8.5e-08 | 6.1 | 6.1 | 9.6e-10 | 0.76 | 0.22 | 0.78 | FALSE |
116 | ROSMAP | Brain Pre-frontal Cortex | P4HTM | 0.04 | 0.06 | lasso | 3 | 0.05 | 4.7e-07 | 4.9 | -5.3 | 1.3e-07 | -0.90 | 0.16 | 0.84 | FALSE |
117 | ROSMAP | Brain Pre-frontal Cortex | KLHDC8B | 0.01 | 0.01 | blup | 255 | 0.01 | 1.0e-02 | 5.8 | 5.7 | 1.3e-08 | 0.82 | 0.07 | 0.48 | FALSE |
118 | ROSMAP | Brain Pre-frontal Cortex | GPX1 | 0.23 | 0.25 | lasso | 10 | 0.30 | 1.5e-39 | 6.3 | 5.8 | 8.7e-09 | 0.89 | 0.04 | 0.96 | FALSE |
119 | YFS | Blood | AMT | 0.15 | 0.18 | lasso | 12 | 0.19 | 1.6e-60 | 6.3 | -6.5 | 9.7e-11 | -0.95 | 0.14 | 0.86 | FALSE |
120 | YFS | Blood | NICN1 | 0.15 | 0.20 | blup | 283 | 0.22 | 3.5e-70 | 6.3 | 6.3 | 2.2e-10 | 0.95 | 0.15 | 0.85 | FALSE |
121 | YFS | Blood | TCTA | 0.01 | 0.00 | bslmm | 282 | 0.00 | 7.6e-02 | 4.8 | -5.3 | 1.4e-07 | -0.73 | 0.07 | 0.51 | FALSE |
122 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | CCDC36 | 0.04 | 0.02 | blup | 49 | 0.03 | 7.8e-04 | 5.8 | -5.6 | 1.6e-08 | -0.69 | 0.08 | 0.60 | FALSE |
123 | The Cancer Genome Atlas | Breast Invasive Carcinoma | AMT | 0.03 | 0.04 | lasso | 1 | 0.03 | 2.2e-07 | 6.3 | -6.3 | 3.3e-10 | -0.96 | 0.00 | 0.99 | FALSE |
124 | The Cancer Genome Atlas | Colon Adenocarcinoma | USP4 | 0.06 | 0.04 | lasso | 5 | 0.05 | 5.3e-04 | 5.7 | 6.5 | 6.4e-11 | 0.92 | 0.01 | 0.93 | FALSE |
125 | The Cancer Genome Atlas | Esophageal Carcinoma | CCDC36 | 0.09 | 0.09 | lasso | 3 | 0.07 | 2.9e-03 | 5.8 | -5.9 | 4.4e-09 | -0.69 | 0.04 | 0.61 | FALSE |
126 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | AMT | 0.03 | 0.02 | lasso | 4 | 0.01 | 1.1e-02 | 6.3 | -6.0 | 2.2e-09 | -0.93 | 0.00 | 0.75 | FALSE |
127 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CCDC36 | 0.11 | 0.12 | enet | 8 | 0.11 | 8.2e-13 | 6.1 | -5.9 | 4.6e-09 | -0.69 | 0.24 | 0.76 | FALSE |
128 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CCDC71 | 0.03 | 0.05 | lasso | 3 | 0.05 | 4.9e-06 | 5.8 | 5.9 | 2.8e-09 | 0.71 | 0.19 | 0.78 | FALSE |
129 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | ARIH2 | 0.07 | 0.01 | lasso | 3 | 0.02 | 1.9e-02 | 4.9 | -5.2 | 1.8e-07 | -0.83 | 0.01 | 0.65 | FALSE |
130 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CCDC71 | 0.02 | 0.01 | blup | 31 | 0.02 | 1.9e-03 | 6.1 | 6.2 | 7.7e-10 | 0.83 | 0.02 | 0.64 | FALSE |
131 | The Cancer Genome Atlas | Lung Adenocarcinoma | AMT | 0.02 | 0.00 | blup | 25 | 0.01 | 5.4e-02 | 6.3 | -6.1 | 1.2e-09 | -0.92 | 0.01 | 0.78 | FALSE |
132 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CCDC36 | 0.10 | 0.09 | enet | 19 | 0.10 | 1.1e-10 | 5.8 | -5.4 | 6.1e-08 | -0.52 | 0.32 | 0.68 | FALSE |
133 | The Cancer Genome Atlas | Stomach Adenocarcinoma | CCDC36 | 0.08 | 0.06 | lasso | 3 | 0.06 | 3.8e-05 | 6.1 | -6.1 | 1.1e-09 | -0.76 | 0.17 | 0.76 | FALSE |