Best TWAS P=9.75e-09 · Best GWAS P=1.6e-09 conditioned to 0.000589
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NTR | Blood | C9orf5 | 0.05 | 0.02 | enet | 14 | 0.03 | 2.2e-10 | 3.3 | -5.7 | 9.7e-09 | -0.55 | 0.47 | 0.53 | TRUE |
| 2 | The Cancer Genome Atlas | Brain Lower Grade Glioma | C9orf4 | 0.08 | 0.03 | blup | 80 | 0.02 | 9.8e-04 | 3.3 | -5.2 | 2.0e-07 | -0.61 | 0.13 | 0.68 | FALSE |