TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Weight
:
←
→
chr17:1,717,695-2,453,908
Best TWAS P=2.81e-07 · Best GWAS P=4.62e-17 conditioned to 2.67e-16
1.7M
1.8M
1.9M
2M
2.1M
2.2M
2.3M
2.4M
0
5
10
15
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Breast Invasive Carcinoma
SMG6
0.03
0.01
blup
144
0.01
0.0048
5.3
5.1
2.8e-07
-0.04
0.01
0.94
TRUE