[Hub]/) : Traits : Whole body fat-free mass :

chr1:752,566-3,191,909

Best TWAS P=1.38e-11 · Best GWAS P=5.23e-10 conditioned to 2.4e-13

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex RER1 0.06 0.00 blup 359 0.01 8.1e-03 1.34 -5.6 2.1e-08 0.30 0.04 0.15 FALSE
2 CommonMind Brain Pre-frontal Cortex SLC35E2 0.35 0.15 enet 24 0.17 1.0e-20 -6.19 5.8 5.6e-09 -0.71 0.01 0.99 FALSE
3 GTEx Adipose Subcutaneous C1orf86 0.15 0.05 enet 10 0.04 2.0e-04 -5.26 -6.6 4.4e-11 0.37 0.34 0.23 FALSE
4 GTEx Adipose Subcutaneous RP11-181G12.2 0.09 0.07 lasso 1 0.05 1.3e-04 -5.26 5.3 1.4e-07 -0.03 0.53 0.30 FALSE
5 GTEx Adipose Visceral Omentum RP1-283E3.4 0.26 0.05 enet 25 0.16 1.5e-08 -2.68 -5.3 1.1e-07 0.21 0.14 0.12 TRUE
6 GTEx Adipose Visceral Omentum RP11-345P4.6 0.40 0.24 enet 28 0.20 1.8e-10 2.33 5.4 6.4e-08 -0.13 1.00 0.00 TRUE
7 GTEx Brain Cerebellar Hemisphere NADK 0.18 0.11 lasso 7 0.09 3.1e-03 -5.61 -5.8 8.4e-09 0.85 0.03 0.61 FALSE
8 GTEx Brain Cerebellar Hemisphere RP5-890O3.9 0.24 0.02 lasso 9 0.02 1.3e-01 -6.21 6.8 1.4e-11 -0.91 0.02 0.67 TRUE
9 GTEx Esophagus Gastroesophageal Junction RP11-181G12.2 0.16 0.02 enet 18 0.01 1.1e-01 5.77 5.9 3.5e-09 -0.06 0.07 0.37 FALSE
10 GTEx Esophagus Mucosa TMEM52 0.17 0.18 lasso 2 0.20 2.9e-13 -5.40 5.4 7.1e-08 -0.83 0.55 0.45 FALSE
11 GTEx Esophagus Muscularis RP11-181G12.2 0.23 0.14 lasso 4 0.19 1.0e-11 5.12 6.0 1.5e-09 -0.06 0.41 0.58 TRUE
12 GTEx Lung NADK 0.07 0.03 lasso 3 0.02 8.5e-03 5.25 -5.8 6.5e-09 0.94 0.04 0.88 FALSE
13 GTEx Lung AL590822.2 0.09 0.00 lasso 3 0.00 2.0e-01 5.46 5.9 4.3e-09 -0.05 0.07 0.26 FALSE
14 GTEx Muscle Skeletal NADK 0.06 0.00 enet 9 0.00 1.3e-01 -5.61 -6.0 1.5e-09 0.79 0.06 0.79 FALSE
15 GTEx Muscle Skeletal C1orf86 0.20 0.16 lasso 4 0.15 8.0e-15 -5.26 -5.4 6.3e-08 0.03 0.67 0.33 FALSE
16 GTEx Muscle Skeletal TMEM52 0.11 0.08 lasso 6 0.10 7.2e-10 -5.75 5.7 9.5e-09 -0.84 0.18 0.82 FALSE
17 GTEx Muscle Skeletal RP11-181G12.2 0.12 0.13 enet 8 0.14 7.6e-14 -5.26 5.5 4.1e-08 -0.03 0.67 0.33 FALSE
18 GTEx Nerve Tibial RP11-181G12.2 0.24 0.22 lasso 5 0.21 3.7e-15 -5.26 5.5 3.1e-08 -0.04 0.67 0.33 FALSE
19 GTEx Pancreas TMEM52 0.19 0.00 enet 30 0.00 2.6e-01 -0.93 -5.2 2.5e-07 0.59 0.03 0.63 FALSE
20 GTEx Skin Not Sun Exposed Suprapubic TMEM52 0.19 0.18 lasso 4 0.14 2.6e-08 5.25 5.6 2.1e-08 -0.92 0.05 0.95 FALSE
21 GTEx Skin Sun Exposed Lower leg TMEM52 0.17 0.14 lasso 7 0.15 2.0e-12 5.79 5.8 5.0e-09 -0.92 0.06 0.94 FALSE
22 GTEx Thyroid PRKCZ 0.16 0.03 lasso 4 0.08 1.9e-06 -4.95 -5.1 3.1e-07 -0.03 0.27 0.06 FALSE
23 METSIM Adipose TNFRSF14 0.07 0.05 blup 373 0.05 1.9e-07 3.95 6.6 4.7e-11 -0.08 0.98 0.01 TRUE
24 ROSMAP Brain Pre-frontal Cortex C1orf222 0.11 0.14 enet 18 0.14 1.8e-17 -4.03 5.7 1.1e-08 -0.70 0.99 0.01 FALSE
25 ROSMAP Brain Pre-frontal Cortex MMP23B 0.05 0.04 lasso 2 0.03 1.9e-04 -5.20 -5.2 2.2e-07 0.80 0.07 0.91 FALSE
26 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma TMEM52 0.02 0.01 blup 37 0.02 6.6e-03 -5.43 5.8 6.6e-09 -0.91 0.01 0.77 FALSE
27 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma C1orf86 0.03 0.02 blup 49 0.01 1.3e-02 5.79 5.4 5.2e-08 -0.05 0.02 0.80 FALSE
28 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma SLC35E2 0.03 0.00 blup 34 0.01 5.3e-02 -5.53 5.1 2.9e-07 -0.82 0.02 0.51 FALSE