Best TWAS P=5.15e-08 · Best GWAS P=3.89e-09 conditioned to 1.68e-07
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Nerve Tibial | EHD4 | 0.20 | 0.04 | lasso | 7 | 0.08 | 2.4e-06 | 3.5 | -5.5 | 5.1e-08 | 0.13 | 0.91 | 0.04 | TRUE |
| 2 | GTEx | Thyroid | RP11-23P13.6 | 0.07 | 0.00 | lasso | 5 | 0.01 | 9.6e-02 | 3.3 | -5.3 | 1.3e-07 | 0.67 | 0.05 | 0.50 | FALSE |