TWAS
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Usage
Models
Genes
Traits
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Traits
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Impedance of whole body
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chr17:29,398,369-31,275,580
Best TWAS P=1.52e-07 · Best GWAS P=1.38e-07 conditioned to 1
29.5M
30M
30.5M
31M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
The Cancer Genome Atlas
Breast Invasive Carcinoma
EVI2A
0.03
0.03
blup
38
0.03
6.9e-07
-5.0
5.2
1.5e-07
-0.97
0.02
0.98
TRUE
1
GTEx
Artery Aorta
RHOT1
0.11
0.00
enet
20
0.01
7.8e-02
3.4
-5.1
2.8e-07
0.02
0.03
0.49
TRUE
2
GTEx
Breast Mammary Tissue (Male)
CTC-542B22.2
0.21
0.07
enet
47
0.05
3.1e-02
3.4
5.2
2.0e-07
-0.25
0.06
0.10
FALSE