TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Impedance of whole body
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chr2:182,305,254-184,084,221
Best TWAS P=1.42e-09 · Best GWAS P=4.39e-12 conditioned to 4.02e-05
182.2M
182.4M
182.6M
182.8M
183M
183.2M
183.4M
183.6M
183.8M
184M
0
2
4
6
8
10
12
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Brain Hypothalamus
PDE1A
0.24
-0.01
enet
21
-0.01
0.75800
-5.4
-6.0
1.4e-09
-0.60
0.07
0.31
TRUE
2
The Cancer Genome Atlas
Lung Squamous Cell Carcinoma
PDE1A
0.05
0.04
blup
206
0.04
0.00005
4.4
-5.4
6.3e-08
-0.42
0.65
0.02
FALSE