[Hub]/) : Traits : Impedance of leg (right) : ← →

chr9:94,394,640-97,136,378

Best TWAS P=1.33e-12 · Best GWAS P=3.25e-14 conditioned to 3.48e-05

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
24	The Cancer Genome Atlas	Soft Tissue Sarcoma	PHF2	0.05	0.03	blup	103	0.04	3.5e-03	6.26	-7.1	1.3e-12	-0.56	0.06	0.35	TRUE
14	The Cancer Genome Atlas	Breast Invasive Carcinoma	CENPP	0.07	0.03	lasso	5	0.06	2.1e-11	5.09	-6.4	1.8e-10	0.02	0.06	0.94	TRUE
9	GTEx	Pituitary	IPPK	0.16	0.07	lasso	4	0.07	8.5e-03	-5.11	-6.1	1.3e-09	0.10	0.08	0.64	TRUE
2	GTEx	Brain Caudate basal ganglia	PHF2	0.42	0.00	enet	33	0.04	2.4e-02	-0.16	-5.6	2.6e-08	-0.25	0.10	0.06	TRUE
5	GTEx	Esophagus Muscularis	BICD2	0.09	0.02	enet	26	0.07	5.0e-05	4.09	5.5	3.1e-08	0.11	0.09	0.59	TRUE
16	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	CENPP	0.06	0.02	blup	160	0.04	6.3e-05	5.09	-6.4	1.8e-10	0.03	0.07	0.87	FALSE
15	The Cancer Genome Atlas	Colon Adenocarcinoma	CENPP	0.21	0.04	enet	16	0.10	1.9e-06	5.09	-6.1	8.1e-10	0.11	0.07	0.78	FALSE
20	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	CENPP	0.06	0.04	blup	160	0.05	5.6e-06	5.09	-6.0	2.2e-09	0.02	0.11	0.86	FALSE
11	GTEx	Small Intestine Terminal Ileum	CENPP	0.29	0.11	enet	11	0.10	2.9e-03	-5.14	-6.0	2.4e-09	0.02	0.10	0.68	FALSE
6	GTEx	Heart Left Ventricle	ECM2	0.07	0.05	lasso	3	0.02	3.1e-02	5.49	5.8	7.7e-09	-0.01	0.08	0.71	FALSE
26	The Cancer Genome Atlas	Thyroid Carcinoma	IPPK	0.03	0.04	blup	50	0.04	6.7e-05	5.18	-5.7	9.3e-09	0.07	0.02	0.98	FALSE
4	GTEx	Cells Transformed fibroblasts	OGN	0.03	0.03	lasso	2	0.01	3.2e-02	-5.53	-5.5	3.2e-08	0.05	0.09	0.86	FALSE
7	GTEx	Liver	ECM2	0.16	0.18	enet	8	0.18	7.4e-06	-5.64	5.5	3.5e-08	-0.07	0.07	0.92	FALSE
3	GTEx	Brain Cerebellum	BICD2	0.23	0.06	enet	21	0.17	8.5e-06	5.53	5.5	3.6e-08	0.09	0.08	0.24	FALSE
10	GTEx	Skin Sun Exposed Lower leg	CENPP	0.20	0.06	lasso	9	0.14	2.9e-11	5.09	-5.5	4.0e-08	-0.02	0.39	0.61	FALSE
17	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	OGN	0.02	0.01	blup	51	0.01	3.4e-02	-4.64	-5.5	4.2e-08	0.06	0.01	0.80	FALSE
8	GTEx	Nerve Tibial	OGN	0.08	0.14	lasso	9	0.12	6.3e-09	-5.13	-5.4	7.0e-08	0.09	0.12	0.88	FALSE
22	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	CENPP	0.10	0.01	blup	161	0.04	6.3e-04	0.31	-5.4	7.0e-08	-0.01	0.10	0.66	FALSE
18	The Cancer Genome Atlas	Lung Adenocarcinoma	OGN	0.07	0.12	blup	52	0.14	1.2e-15	-4.94	-5.4	7.2e-08	0.05	0.03	0.97	FALSE
21	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	OGN	0.02	0.02	blup	52	0.02	2.8e-03	4.40	-5.3	1.0e-07	0.09	0.03	0.90	FALSE
23	The Cancer Genome Atlas	Pancreatic Adenocarcinoma	OGN	0.05	0.02	blup	52	0.03	2.4e-02	4.40	-5.3	1.3e-07	0.09	0.03	0.55	FALSE
1	CommonMind	Brain Pre-frontal Cortex	OGN	0.04	0.04	lasso	4	0.04	2.3e-05	-4.61	-5.3	1.4e-07	-0.01	0.11	0.87	FALSE
12	NTR	Blood	IPPK	0.02	0.01	bslmm	416	0.01	9.9e-06	-5.53	-5.2	1.7e-07	0.07	0.07	0.93	FALSE
19	The Cancer Genome Atlas	Lung Adenocarcinoma	PHF2	0.07	0.03	blup	104	0.05	1.9e-06	-4.31	-5.2	1.7e-07	-0.05	0.83	0.00	FALSE
27	The Cancer Genome Atlas	Thyroid Carcinoma	NOL8	0.02	0.01	blup	38	0.02	7.3e-03	-4.63	5.2	1.8e-07	-0.09	0.02	0.71	FALSE
13	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	CENPP	0.08	0.00	lasso	6	0.00	1.3e-01	-3.64	-5.2	2.2e-07	-0.04	0.04	0.33	FALSE
25	The Cancer Genome Atlas	Stomach Adenocarcinoma	CENPP	0.14	0.03	blup	160	0.04	6.7e-04	5.09	-5.1	2.9e-07	-0.03	0.16	0.64	FALSE