TWAS
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Traits
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Traits
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Impedance of arm (right)
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chr1:159,559,531-161,006,019
Best TWAS P=3.9e-10 · Best GWAS P=8.41e-10 conditioned to 0.0692
159.6M
159.8M
160M
160.2M
160.4M
160.6M
160.8M
161M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
The Cancer Genome Atlas
Prostate Adenocarcinoma
NCSTN
0.06
0.02
blup
46
0.03
9.8e-04
5.4
-6.3
3.9e-10
-0.81
0.01
0.90
TRUE
2
The Cancer Genome Atlas
Prostate Adenocarcinoma
COPA
0.05
0.03
lasso
3
0.03
8.3e-04
6.1
-6.1
9.0e-10
-1.00
0.00
0.97
FALSE
1
CommonMind
Brain Pre-frontal Cortex
COPA
0.09
0.08
lasso
2
0.08
6.1e-10
6.1
-5.8
6.3e-09
-0.83
0.00
0.99
FALSE