TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Impedance of arm (left)
:
←
→
chr8:56,269,387-57,683,880
Best TWAS P=1.05e-08 · Best GWAS P=1.95e-08 conditioned to 0.162
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
The Cancer Genome Atlas
Brain Lower Grade Glioma
RPS20
0.33
0.07
enet
8
0.07
1.7e-08
5.6
5.7
1.0e-08
0.86
0.00
1.00
TRUE
4
The Cancer Genome Atlas
Prostate Adenocarcinoma
RPS20
0.04
0.03
lasso
3
0.04
1.3e-04
5.6
5.7
1.5e-08
0.98
0.00
0.97
FALSE
2
ROSMAP
Brain Pre-frontal Cortex
RP11-446E9.1
0.23
0.32
lasso
7
0.34
2.0e-45
4.8
-5.3
1.0e-07
-0.97
0.02
0.98
FALSE
1
ROSMAP
Brain Pre-frontal Cortex
RPS20
0.24
0.20
lasso
6
0.23
3.4e-29
5.6
5.3
1.2e-07
0.94
0.00
1.00
FALSE