TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Leg fat percentage (right)
:
←
→
chr15:72,287,856-74,291,976
Best TWAS P=1.57e-10 · Best GWAS P=7.72e-14 conditioned to 2.43e-05
72.5M
73M
73.5M
74M
0
5
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Pituitary
BBS4
0.27
0.02
enet
21
0.05
2.1e-02
-4.8
-6.4
1.6e-10
0.69
0.05
0.52
TRUE
3
GTEx
Testis
ADPGK-AS1
0.17
0.05
lasso
4
0.03
1.3e-02
-4.4
6.2
4.2e-10
-0.72
0.02
0.90
FALSE
2
GTEx
Spleen
NEO1
0.39
0.00
lasso
9
0.01
2.0e-01
5.4
-5.5
4.7e-08
0.25
0.05
0.11
FALSE
4
NTR
Blood
NEO1
0.04
0.01
lasso
4
0.02
4.1e-06
5.4
-5.2
2.0e-07
0.25
0.88
0.06
FALSE