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chr17:27,222,988-29,126,951

Best TWAS P=1.96e-10 · Best GWAS P=1.13e-10 conditioned to 0.0463

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
7	The Cancer Genome Atlas	Colon Adenocarcinoma	CCDC55	0.15	0.01	blup	64	0.04	1.9e-03	-5.83	6.4	2.0e-10	-0.85	0.02	0.58	TRUE
11	The Cancer Genome Atlas	Prostate Adenocarcinoma	EFCAB5	0.04	0.03	enet	10	0.02	6.0e-03	-5.38	-5.9	3.4e-09	0.85	0.04	0.93	FALSE
1	CommonMind	Brain Pre-frontal Cortex	EFCAB5	0.11	0.18	blup	392	0.17	1.7e-20	-5.39	-5.9	4.1e-09	0.91	0.17	0.83	FALSE
4	GTEx	Thyroid	ANKRD13B	0.23	0.12	lasso	6	0.18	2.3e-13	-4.37	-5.6	2.1e-08	0.67	0.90	0.09	FALSE
8	The Cancer Genome Atlas	Colon Adenocarcinoma	EFCAB5	0.06	0.05	blup	79	0.03	5.7e-03	-5.39	-5.4	5.7e-08	0.92	0.04	0.93	FALSE
9	The Cancer Genome Atlas	Esophageal Carcinoma	CCDC55	0.27	0.00	blup	64	0.00	3.5e-01	-0.46	5.4	6.5e-08	-0.61	0.01	0.38	FALSE
13	The Cancer Genome Atlas	Thyroid Carcinoma	EFCAB5	0.11	0.18	enet	13	0.20	5.8e-19	-5.39	-5.4	7.7e-08	0.92	0.12	0.88	FALSE
3	GTEx	Lung	SSH2	0.08	0.05	lasso	6	0.06	2.7e-05	-4.46	-5.3	9.3e-08	0.87	0.54	0.46	FALSE
12	The Cancer Genome Atlas	Soft Tissue Sarcoma	EFCAB5	0.06	0.07	lasso	2	0.05	8.2e-04	-5.39	-5.3	1.1e-07	0.92	0.05	0.94	FALSE
5	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	EFCAB5	0.06	0.08	lasso	2	0.07	1.4e-06	-4.79	-5.3	1.2e-07	0.85	0.07	0.93	FALSE
2	GTEx	Brain Nucleus accumbens basal ganglia	CORO6	0.11	0.10	lasso	2	0.05	2.2e-02	-5.26	5.3	1.3e-07	-0.89	0.06	0.74	FALSE
6	The Cancer Genome Atlas	Breast Invasive Carcinoma	EFCAB5	0.02	0.04	lasso	4	0.04	1.9e-08	-5.39	-5.2	1.8e-07	0.92	0.09	0.91	FALSE
10	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	EFCAB5	0.04	0.04	lasso	4	0.05	5.9e-06	-4.86	-5.2	2.3e-07	0.84	0.07	0.93	FALSE