Best TWAS P=9.22e-08 · Best GWAS P=2.87e-08 conditioned to 0.00444
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | NOP58 | 0.05 | 0.02 | blup | 365 | 0.03 | 3.2e-04 | 2.5 | 5.3 | 9.2e-08 | 0.62 | 0.25 | 0.38 | TRUE |
| 2 | GTEx | Pancreas | ICA1L | 0.17 | 0.07 | lasso | 8 | 0.10 | 4.9e-05 | 3.9 | -5.1 | 2.7e-07 | -0.37 | 0.04 | 0.27 | FALSE |