Best TWAS P=1.43e-08 · Best GWAS P=2.18e-08 conditioned to 3.75e-08
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | ACYP2 | 0.06 | 0.02 | blup | 561 | 0.03 | 4.8e-05 | -4.4 | 5.7 | 1.4e-08 | -0.02 | 0.02 | 0.98 | TRUE |
| 2 | GTEx | Breast Mammary Tissue (Female) | HMGB1P31 | 0.19 | 0.06 | enet | 32 | 0.07 | 4.7e-03 | -2.3 | -5.3 | 9.8e-08 | 0.00 | 0.02 | 0.86 | FALSE |
| 3 | GTEx | Testis | HMGB1P31 | 0.17 | 0.01 | enet | 21 | 0.02 | 4.6e-02 | -2.0 | -5.5 | 3.1e-08 | 0.03 | 0.11 | 0.64 | FALSE |