[Hub]/) : Traits : Arm fat-free mass (left) :

chr4:305,291-2,437,290

Best TWAS P=3.43e-14 · Best GWAS P=1.16e-12 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex CRIPAK 0.31 0.15 enet 34 0.26 1.2e-31 -4.3 -6.0 1.7e-09 0.52 1.00 0.00 FALSE
2 GTEx Adipose Subcutaneous CRIPAK 0.42 0.11 enet 42 0.34 9.0e-29 -4.3 -5.6 1.6e-08 0.42 1.00 0.00 FALSE
3 GTEx Adipose Visceral Omentum UVSSA 0.46 0.05 lasso 11 0.24 1.1e-12 -5.0 -5.6 2.1e-08 0.48 0.21 0.76 FALSE
4 GTEx Adipose Visceral Omentum CRIPAK 0.47 0.24 lasso 12 0.31 1.3e-16 -4.4 -6.0 2.4e-09 0.26 1.00 0.00 FALSE
5 GTEx Artery Aorta UVSSA 0.33 0.06 enet 30 0.28 7.2e-16 -5.0 -5.5 3.2e-08 0.56 0.01 0.99 FALSE
6 GTEx Artery Aorta CRIPAK 0.31 0.20 enet 34 0.30 2.8e-17 -4.4 -5.4 7.2e-08 0.45 0.90 0.10 FALSE
7 GTEx Brain Caudate basal ganglia CRIPAK 0.27 0.00 lasso 2 0.02 9.3e-02 -5.0 -5.6 2.7e-08 0.24 0.05 0.20 FALSE
8 GTEx Brain Cerebellum CRIPAK 0.37 0.09 enet 24 0.31 8.8e-10 -4.4 -5.9 3.7e-09 0.47 0.13 0.69 FALSE
9 GTEx Brain Cortex CRIPAK 0.34 0.10 lasso 6 0.18 9.5e-06 -4.4 -6.7 1.7e-11 0.47 0.04 0.80 FALSE
10 GTEx Brain Hippocampus CRIPAK 0.48 0.22 lasso 4 0.23 4.0e-06 -4.6 -7.0 3.3e-12 0.46 0.07 0.68 FALSE
11 GTEx Brain Hypothalamus CRIPAK 0.22 0.00 lasso 5 0.01 2.1e-01 -5.0 -5.7 9.9e-09 0.23 0.06 0.08 FALSE
12 GTEx Brain Nucleus accumbens basal ganglia CRIPAK 0.34 0.13 lasso 6 0.25 2.7e-07 -4.4 -5.9 4.1e-09 0.23 0.13 0.38 FALSE
13 GTEx Brain Putamen basal ganglia CRIPAK 0.30 0.00 enet 25 0.10 1.9e-03 -4.2 -6.2 4.9e-10 0.49 0.02 0.66 FALSE
14 GTEx Breast Mammary Tissue CRIPAK 0.42 0.12 enet 35 0.39 5.2e-21 -4.4 -5.4 8.1e-08 0.30 0.99 0.01 FALSE
15 GTEx Breast Mammary Tissue (Female) CRIPAK 0.32 0.17 enet 29 0.26 2.7e-08 -4.3 -6.7 2.1e-11 0.34 0.36 0.34 FALSE
16 GTEx Cells EBV-transformed lymphocytes CRIPAK 0.49 0.27 lasso 8 0.35 2.9e-12 -4.4 -5.7 1.0e-08 0.22 0.84 0.02 FALSE
17 GTEx Colon Sigmoid CRIPAK 0.40 0.21 lasso 7 0.30 4.7e-11 -5.2 -5.6 2.1e-08 0.25 0.68 0.08 FALSE
18 GTEx Colon Transverse TMEM129 0.23 0.05 lasso 4 0.03 1.8e-02 -5.5 5.7 1.4e-08 0.02 0.08 0.10 FALSE
19 GTEx Colon Transverse CRIPAK 0.33 0.10 enet 22 0.24 5.8e-12 -4.6 -5.6 2.8e-08 0.36 0.93 0.04 FALSE
20 GTEx Colon Transverse RP11-20I20.4 0.17 0.05 lasso 3 0.05 2.3e-03 -5.2 -5.6 2.4e-08 0.09 0.43 0.03 FALSE
21 GTEx Esophagus Gastroesophageal Junction CRIPAK 0.33 0.20 lasso 5 0.30 1.4e-11 -4.4 -5.4 5.3e-08 0.22 0.98 0.00 FALSE
22 GTEx Esophagus Mucosa CRIPAK 0.49 0.14 enet 28 0.40 6.8e-29 -4.4 -5.7 1.1e-08 0.53 0.57 0.43 FALSE
23 GTEx Esophagus Muscularis CRIPAK 0.38 0.14 enet 34 0.30 2.6e-18 -4.4 -5.4 7.2e-08 0.31 1.00 0.00 FALSE
24 GTEx Heart Atrial Appendage CRIPAK 0.31 0.26 enet 23 0.33 2.1e-15 -4.4 -5.5 2.8e-08 0.32 1.00 0.00 FALSE
25 GTEx Lung CRIPAK 0.61 0.22 enet 46 0.41 1.1e-33 -4.4 -6.8 1.0e-11 0.45 1.00 0.00 FALSE
26 GTEx Lung RP11-20I20.4 0.07 0.00 lasso 3 0.01 6.0e-02 -5.2 -5.8 5.9e-09 0.19 0.14 0.03 FALSE
27 GTEx Muscle Skeletal FGFRL1 0.14 0.08 lasso 4 0.06 3.7e-06 -7.1 6.5 7.7e-11 -0.98 0.00 1.00 TRUE
28 GTEx Muscle Skeletal CRIPAK 0.25 0.11 enet 32 0.18 7.6e-18 -4.4 -6.0 2.2e-09 0.52 0.92 0.08 FALSE
29 GTEx Nerve Tibial CRIPAK 0.50 0.11 enet 76 0.38 1.1e-28 -4.6 -7.0 3.0e-12 0.46 1.00 0.00 FALSE
30 GTEx Ovary UVSSA 0.33 0.10 enet 12 0.32 1.5e-08 -5.0 -5.3 1.4e-07 0.40 0.06 0.50 FALSE
31 GTEx Ovary CRIPAK 0.43 0.27 enet 19 0.32 9.0e-09 -4.4 -6.2 5.8e-10 0.44 0.24 0.51 FALSE
32 GTEx Pancreas TMEM129 0.20 0.19 lasso 3 0.14 1.5e-06 -5.5 5.2 2.5e-07 0.02 0.59 0.35 FALSE
33 GTEx Pancreas CRIPAK 0.34 0.13 lasso 6 0.27 1.0e-11 -4.6 -6.2 4.5e-10 0.31 0.70 0.17 FALSE
34 GTEx Thyroid AC016773.1 0.11 0.07 enet 7 0.06 3.9e-05 -5.6 5.1 2.8e-07 0.02 0.51 0.27 FALSE
35 GTEx Uterus CRIPAK 0.52 0.34 lasso 3 0.33 1.7e-07 -5.0 -5.3 8.7e-08 0.21 0.23 0.07 FALSE
36 GTEx Whole Blood TACC3 0.11 0.05 enet 7 0.06 2.8e-06 -3.6 5.3 9.8e-08 0.01 0.80 0.17 FALSE
37 GTEx Whole Blood CRIPAK 0.38 0.17 lasso 9 0.28 3.4e-26 -4.6 -6.1 9.3e-10 0.32 1.00 0.00 FALSE
38 GTEx Whole Blood AC016773.1 0.27 0.21 enet 8 0.22 1.2e-19 -5.5 5.4 7.8e-08 0.02 0.63 0.37 FALSE
39 METSIM Adipose CRIPAK 0.28 0.16 bslmm 335 0.25 2.7e-37 -4.6 -6.6 3.5e-11 0.36 1.00 0.00 FALSE
40 METSIM Adipose UVSSA 0.26 0.04 bslmm 366 0.12 9.0e-18 1.4 -5.7 1.4e-08 0.34 0.40 0.60 FALSE
41 NTR Blood CRIPAK 0.13 0.09 enet 31 0.15 1.5e-46 -3.9 -7.6 3.4e-14 0.40 1.00 0.00 TRUE
42 NTR Blood KIAA1530 0.19 0.04 blup 345 0.10 9.1e-32 -5.0 -6.6 4.9e-11 0.48 0.88 0.12 FALSE
43 NTR Blood SLBP 0.04 0.02 lasso 5 0.02 2.8e-08 -5.6 6.2 5.4e-10 0.01 0.03 0.97 FALSE
44 NTR Blood TACC3 0.05 0.03 lasso 9 0.04 2.7e-13 -5.5 6.5 6.0e-11 -0.02 0.39 0.61 TRUE
45 ROSMAP Brain Pre-frontal Cortex CRIPAK 0.31 0.23 lasso 12 0.40 6.4e-55 -4.6 -5.6 2.0e-08 0.38 1.00 0.00 FALSE
46 YFS Blood CRIPAK 0.35 0.27 bslmm 301 0.33 6.0e-112 -4.6 -6.3 2.7e-10 0.24 1.00 0.00 FALSE
47 YFS Blood SLBP 0.10 0.12 lasso 3 0.12 1.2e-35 -5.5 5.5 4.4e-08 0.02 0.63 0.37 FALSE
48 The Cancer Genome Atlas Breast Invasive Carcinoma CRIPAK 0.22 0.11 blup 28 0.14 5.6e-28 -4.6 -6.0 1.5e-09 0.17 0.00 0.98 FALSE
49 The Cancer Genome Atlas Colon Adenocarcinoma CRIPAK 0.38 0.16 blup 28 0.21 2.8e-12 -4.6 -5.3 9.5e-08 0.29 0.00 0.98 FALSE
50 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma CRIPAK 0.28 0.16 blup 28 0.19 3.2e-21 -4.6 -5.7 1.2e-08 0.24 0.00 0.98 FALSE
51 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma CRIPAK 0.21 0.10 enet 9 0.15 1.3e-16 -4.6 -5.3 9.5e-08 0.27 0.00 0.97 FALSE
52 The Cancer Genome Atlas Brain Lower Grade Glioma CRIPAK 0.31 0.11 enet 10 0.18 1.5e-19 -4.6 -5.5 3.6e-08 0.33 0.00 0.98 FALSE
53 The Cancer Genome Atlas Liver Hepatocellular Carcinoma CRIPAK 0.13 0.06 blup 29 0.08 1.2e-04 -4.6 -5.3 1.5e-07 0.24 0.00 0.75 FALSE
54 The Cancer Genome Atlas Rectum Adenocarcinoma CRIPAK 0.37 0.07 lasso 2 0.12 1.2e-03 -4.6 -5.3 1.1e-07 0.20 0.00 0.28 FALSE
55 The Cancer Genome Atlas Thyroid Carcinoma CRIPAK 0.38 0.22 enet 12 0.25 5.4e-24 -4.6 -5.5 3.5e-08 0.21 0.00 0.98 FALSE