[Hub]/) : Traits : Arm predicted mass (left) : ← →

chr19:9,637,688-11,873,382

Best TWAS P=8.12e-16 · Best GWAS P=1.32e-15 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex S1PR2 0.07 0.02 bslmm 369 0.03 5.3e-05 -5.1 5.6 2.5e-08 0.31 0.33 0.12 FALSE
2 GTEx Esophagus Mucosa SLC44A2 0.13 0.00 lasso 6 0.02 1.4e-02 5.1 -6.2 7.5e-10 -0.46 0.07 0.55 FALSE
3 GTEx Esophagus Mucosa ILF3-AS1 0.11 0.00 lasso 4 0.00 2.5e-01 7.9 -6.1 1.0e-09 -0.77 0.02 0.85 FALSE
4 GTEx Muscle Skeletal SLC44A2 0.19 0.18 lasso 5 0.19 5.1e-18 6.6 7.2 5.9e-13 0.79 0.84 0.16 FALSE
5 GTEx Nerve Tibial ILF3-AS1 0.14 0.04 lasso 3 0.08 3.8e-06 7.8 -6.4 1.3e-10 -0.77 0.01 0.98 FALSE
6 GTEx Skin Sun Exposed Lower leg SMARCA4 0.15 0.10 enet 25 0.15 1.4e-12 2.6 -5.5 4.1e-08 -0.61 1.00 0.00 FALSE
7 GTEx Testis PDE4A 0.20 0.02 enet 39 0.04 6.4e-03 5.4 6.4 1.8e-10 0.06 0.06 0.04 TRUE
8 GTEx Whole Blood CTD-2369P2.8 0.12 0.11 lasso 3 0.10 9.2e-10 6.2 6.7 2.4e-11 0.06 1.00 0.00 TRUE
9 NTR Blood SMARCA4 0.07 0.06 lasso 11 0.06 9.0e-18 4.8 -5.4 7.5e-08 -0.43 1.00 0.00 FALSE
10 The Cancer Genome Atlas Breast Invasive Carcinoma S1PR2 0.02 0.00 blup 32 0.01 1.5e-02 -5.6 5.7 1.3e-08 0.04 0.00 0.64 TRUE
11 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma LOC147727 0.13 0.02 blup 28 0.04 7.2e-05 7.9 -5.5 3.9e-08 -0.76 0.01 0.88 FALSE
12 The Cancer Genome Atlas Brain Lower Grade Glioma FDX1L 0.06 0.00 blup 53 0.02 5.1e-03 -4.0 -5.7 1.0e-08 0.05 0.01 0.21 FALSE
13 The Cancer Genome Atlas Brain Lower Grade Glioma LOC147727 0.07 0.02 lasso 2 0.02 5.4e-03 7.9 -8.1 8.1e-16 -0.99 0.01 0.84 TRUE
14 The Cancer Genome Atlas Thyroid Carcinoma SLC44A2 0.32 0.22 enet 14 0.25 3.8e-24 7.7 6.0 1.8e-09 0.85 0.05 0.95 FALSE