[Hub]/) : Traits : Trunk fat percentage : ← →

chr2:134,513,621-137,323,986

Best TWAS P=3.53e-10 · Best GWAS P=3.15e-10 conditioned to 0.259

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex LOC100129961 0.17 0.14 enet 9 0.14 2.6e-17 6.2 6.1 1.4e-09 0.93 0.01 0.99 FALSE
2 GTEx Esophagus Muscularis TMEM163 0.09 0.05 lasso 6 0.05 4.8e-04 -3.8 5.2 2.3e-07 0.74 0.07 0.91 FALSE
3 GTEx Testis AC016725.4 0.18 0.09 lasso 6 0.09 6.3e-05 6.2 -6.3 3.5e-10 -0.94 0.03 0.97 TRUE
4 NTR Blood CCNT2 0.01 0.00 blup 370 0.00 6.7e-02 -4.4 -5.7 1.2e-08 -0.68 0.16 0.39 FALSE
5 NTR Blood MCM6 0.02 0.02 lasso 2 0.03 1.2e-08 -5.0 -5.2 2.3e-07 -0.47 0.06 0.94 FALSE
6 ROSMAP Brain Pre-frontal Cortex TMEM163 0.19 0.16 lasso 14 0.23 6.2e-29 -2.9 5.2 2.4e-07 0.68 0.98 0.02 FALSE
7 YFS Blood CCNT2 0.01 0.01 blup 363 0.01 6.3e-05 -3.7 -5.4 5.2e-08 -0.70 0.33 0.53 FALSE
8 YFS Blood MCM6 0.18 0.15 enet 20 0.20 8.5e-64 -5.8 -5.9 4.4e-09 -0.46 0.00 1.00 FALSE
9 The Cancer Genome Atlas Breast Invasive Carcinoma LCT 0.02 0.02 enet 3 0.03 7.6e-07 -5.8 5.6 2.3e-08 0.47 0.00 1.00 FALSE
10 The Cancer Genome Atlas Glioblastoma Multiforme LCT 0.16 0.08 blup 36 0.10 5.3e-04 -5.0 5.2 2.3e-07 0.40 0.00 0.89 FALSE
11 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma ACMSD 0.04 0.01 blup 46 0.02 2.2e-03 -4.4 -5.3 8.7e-08 -0.87 0.02 0.85 FALSE
12 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma LCT 0.04 0.02 blup 36 0.02 1.9e-03 -5.0 5.8 6.7e-09 0.48 0.01 0.98 FALSE
13 The Cancer Genome Atlas Prostate Adenocarcinoma DARS 0.04 0.02 blup 40 0.01 2.1e-02 -4.2 -5.2 1.6e-07 -0.42 0.01 0.72 FALSE
14 The Cancer Genome Atlas Soft Tissue Sarcoma LCT 0.09 0.04 blup 36 0.05 4.9e-04 -5.8 5.7 1.2e-08 0.43 0.00 0.90 FALSE