[Hub]/) : Traits : Trunk fat mass :

chr20:61,636,050-62,912,463

Best TWAS P=2.76e-11 · Best GWAS P=4.7e-11 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex ARFRP1 0.07 0.07 lasso 3 0.06 5.3e-08 -6.0 5.7 1.4e-08 -0.95 0.01 0.99 FALSE
2 METSIM Adipose TPD52L2 0.03 0.00 bslmm 207 0.02 1.5e-03 5.2 6.0 2.3e-09 -0.68 0.02 0.71 FALSE
3 YFS Blood LIME1 0.12 0.19 enet 15 0.19 5.3e-59 -6.6 -6.7 2.8e-11 0.99 0.00 1.00 TRUE
4 YFS Blood SLC2A4RG 0.03 0.02 lasso 11 0.02 4.2e-08 -4.8 -5.2 2.4e-07 0.61 0.77 0.23 FALSE
5 The Cancer Genome Atlas Lung Adenocarcinoma TNFRSF6B 0.02 0.01 enet 7 0.01 6.9e-03 -4.0 -5.3 9.5e-08 0.92 0.02 0.86 FALSE
6 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma TNFRSF6B 0.05 0.02 blup 44 0.03 2.9e-03 -6.2 -5.9 3.9e-09 0.92 0.01 0.69 FALSE
7 The Cancer Genome Atlas Prostate Adenocarcinoma ARFRP1 0.03 0.02 lasso 2 0.02 1.2e-03 -6.0 6.0 2.1e-09 -0.96 0.01 0.96 FALSE
8 The Cancer Genome Atlas Prostate Adenocarcinoma LIME1 0.04 0.05 blup 47 0.05 9.0e-06 -6.5 -6.5 1.0e-10 0.97 0.00 0.99 FALSE
9 The Cancer Genome Atlas Prostate Adenocarcinoma SLC2A4RG 0.05 0.01 blup 48 0.02 2.0e-03 -6.1 5.2 2.0e-07 -0.83 0.01 0.94 FALSE
10 The Cancer Genome Atlas Testicular Germ Cell Tumors LIME1 0.10 0.02 blup 47 0.04 1.5e-02 -6.1 -5.5 4.6e-08 0.90 0.01 0.63 FALSE
11 The Cancer Genome Atlas Thyroid Carcinoma ARFRP1 0.04 0.00 blup 51 0.00 1.3e-01 -6.6 5.7 1.1e-08 -0.80 0.01 0.67 FALSE