TWAS
hub
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Usage
Models
Genes
Traits
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Traits
:
Trunk fat mass
:
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chr22:17,414,103-18,655,860
Best TWAS P=4.35e-08 · Best GWAS P=4.53e-08 conditioned to 0.178
17.4M
17.6M
17.8M
18M
18.2M
18.4M
18.6M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
CommonMind
Brain Pre-frontal Cortex
BCL2L13
0.19
0.09
lasso
13
0.12
5.9e-15
5.5
-5.5
4.3e-08
-0.88
0.00
1.00
TRUE
3
YFS
Blood
BCL2L13
0.08
0.07
bslmm
544
0.10
1.6e-30
4.7
5.4
8.0e-08
0.77
0.02
0.98
FALSE
2
GTEx
Artery Tibial
BID
0.15
0.07
enet
21
0.07
6.3e-06
4.7
-5.2
2.0e-07
-0.83
0.01
0.99
FALSE