[Hub]/) : Traits : Trunk fat-free mass : ← →

chr11:17,923,676-19,345,331

Best TWAS P=3.11e-11 · Best GWAS P=6.13e-10 conditioned to 1

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
2	GTEx	Artery Aorta	SPTY2D1	0.13	0.17	enet	10	0.16	2.5e-09	6.2	6.6	3.1e-11	0.97	0.00	1.00	TRUE
5	The Cancer Genome Atlas	Lung Adenocarcinoma	SPTY2D1	0.06	0.07	lasso	2	0.06	1.5e-07	6.2	6.2	7.5e-10	1.00	0.00	1.00	FALSE
7	The Cancer Genome Atlas	Prostate Adenocarcinoma	SPTY2D1	0.14	0.20	lasso	3	0.20	4.4e-21	6.2	6.1	8.3e-10	1.00	0.00	1.00	FALSE
6	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	SPTY2D1	0.03	0.00	blup	43	0.01	2.0e-02	6.2	6.1	1.1e-09	0.93	0.00	0.99	FALSE
3	GTEx	Cells Transformed fibroblasts	SPTY2D1	0.31	0.27	lasso	6	0.26	2.5e-19	6.1	6.0	2.4e-09	1.00	0.00	1.00	FALSE
8	The Cancer Genome Atlas	Thyroid Carcinoma	SPTY2D1	0.10	0.09	lasso	3	0.09	3.2e-09	6.1	6.0	2.7e-09	1.00	0.01	0.99	FALSE
1	GTEx	Adipose Subcutaneous	SPTY2D1	0.18	0.14	lasso	5	0.14	6.7e-12	-5.9	5.8	6.1e-09	0.54	0.02	0.98	FALSE
4	GTEx	Cells Transformed fibroblasts	SPTY2D1-AS1	0.14	0.12	lasso	6	0.11	9.0e-09	6.1	5.7	1.6e-08	0.99	0.00	1.00	FALSE