TWAS
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Traits
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Traits
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Trunk fat-free mass
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chr19:45,187,302-45,695,738
Best TWAS P=4.97e-09 · Best GWAS P=1.8e-07 conditioned to 0.503
45.2M
45.3M
45.4M
45.5M
45.6M
45.7M
0
2
4
6
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
The Cancer Genome Atlas
Brain Lower Grade Glioma
APOC4
0.06
0.03
blup
34
0.04
8.4e-06
-5.0
-5.8
5.0e-09
0.83
0.01
0.98
TRUE
1
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
APOC1P1
0.05
0.03
blup
37
0.03
5.2e-04
2.3
-5.5
3.5e-08
0.41
0.11
0.06
FALSE
2
The Cancer Genome Atlas
Kidney Renal Papillary Cell Carcinoma
APOC2
0.27
0.25
enet
14
0.24
3.8e-14
-5.0
5.2
2.3e-07
-0.93
0.00
0.99
FALSE
4
The Cancer Genome Atlas
Thyroid Carcinoma
APOC4
0.09
0.08
enet
9
0.12
1.9e-11
-5.2
-5.1
2.8e-07
0.87
0.00
0.99
FALSE