[Hub]/) : Traits : Trunk predicted mass : ← →

chr1:40,748,755-42,542,658

Best TWAS P=1.41e-44 · Best GWAS P=3.19e-34 conditioned to 0.00838

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
19	The Cancer Genome Atlas	Thyroid Carcinoma	SCMH1	0.07	0.08	blup	97	0.07	2.5e-07	11.825	-14.0	1.4e-44	-0.75	0.13	0.86	TRUE
17	The Cancer Genome Atlas	Prostate Adenocarcinoma	SCMH1	0.03	0.03	lasso	2	0.02	6.2e-03	12.194	-12.2	3.4e-34	-1.00	0.01	0.96	FALSE
8	GTEx	Nerve Tibial	SCMH1	0.16	0.03	enet	24	0.07	1.6e-05	11.860	-11.2	2.6e-29	-0.70	0.04	0.96	FALSE
7	GTEx	Lung	CTPS1	0.06	0.04	lasso	3	0.04	2.4e-04	9.706	10.3	8.1e-25	0.77	0.21	0.63	FALSE
1	GTEx	Artery Aorta	CTPS1	0.10	0.00	enet	8	0.00	4.6e-01	9.246	9.6	7.6e-22	0.75	0.05	0.59	FALSE
5	GTEx	Cells EBV-transformed lymphocytes	CTPS1	0.26	0.11	lasso	6	0.08	1.6e-03	9.469	9.0	2.8e-19	0.70	0.19	0.36	FALSE
9	GTEx	Testis	SLFNL1	0.30	0.17	lasso	14	0.28	5.3e-13	11.946	8.8	9.2e-19	0.85	0.01	0.99	FALSE
15	The Cancer Genome Atlas	Brain Lower Grade Glioma	SCMH1	0.04	0.01	enet	7	0.02	2.5e-03	-0.003	-8.3	8.3e-17	-0.70	0.01	0.82	FALSE
4	GTEx	Breast Mammary Tissue (Female)	CTPS1	0.12	-0.01	lasso	4	-0.01	7.5e-01	8.591	7.8	6.3e-15	0.61	0.04	0.10	FALSE
18	The Cancer Genome Atlas	Testicular Germ Cell Tumors	SCMH1	0.35	0.14	blup	96	0.14	1.5e-05	-5.598	6.9	6.7e-12	0.47	0.18	0.25	FALSE
13	The Cancer Genome Atlas	Breast Invasive Carcinoma	SLFNL1	0.03	0.01	enet	6	0.02	5.6e-05	-1.609	6.7	1.9e-11	0.58	0.11	0.74	FALSE
10	GTEx	Testis	CTPS1	0.57	0.28	enet	17	0.38	1.0e-17	-4.001	6.7	2.3e-11	0.48	0.97	0.03	FALSE
3	GTEx	Brain Cerebellum	FOXO6	0.35	0.33	enet	21	0.36	1.2e-11	4.151	6.6	3.2e-11	-0.01	0.99	0.01	FALSE
12	ROSMAP	Brain Pre-frontal Cortex	CTPS1	0.04	0.04	enet	7	0.04	9.1e-06	8.563	6.2	6.2e-10	0.59	0.60	0.16	FALSE
11	METSIM	Adipose	CTPS1	0.11	0.09	enet	31	0.09	6.2e-14	-4.001	5.7	9.3e-09	0.28	1.00	0.00	FALSE
14	The Cancer Genome Atlas	Brain Lower Grade Glioma	CTPS	0.05	0.04	blup	49	0.03	1.0e-04	-4.001	5.7	1.4e-08	0.33	0.13	0.09	FALSE
6	GTEx	Esophagus Muscularis	SCMH1	0.18	0.03	enet	19	0.10	1.1e-06	-1.609	-5.6	2.7e-08	-0.10	0.55	0.04	FALSE
2	GTEx	Artery Coronary	CTPS1	0.25	-0.01	enet	23	0.00	3.0e-01	1.383	5.5	4.3e-08	0.39	0.07	0.13	FALSE
16	The Cancer Genome Atlas	Lung Adenocarcinoma	CTPS	0.06	0.00	enet	14	0.02	3.3e-03	-1.024	-5.3	1.0e-07	-0.34	0.03	0.13	FALSE