[Hub]/) : Traits : Trunk predicted mass :

chr9:93,476,005-96,338,382

Best TWAS P=2.65e-09 · Best GWAS P=8.3e-11 conditioned to 0.00607

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Artery Aorta ECM2 0.11 0.10 lasso 10 0.09 1.1e-05 -4.3 -5.2 2.2e-07 0.79 0.28 0.70 FALSE
2 GTEx Brain Cerebellum ZNF484 0.21 0.01 lasso 9 0.01 1.7e-01 -5.6 -5.3 1.1e-07 0.79 0.08 0.29 FALSE
3 GTEx Esophagus Muscularis BICD2 0.09 0.02 enet 26 0.07 5.0e-05 -4.5 -5.5 4.1e-08 0.57 0.04 0.79 FALSE
4 GTEx Heart Left Ventricle ECM2 0.07 0.05 lasso 3 0.02 3.1e-02 -5.7 -5.5 3.8e-08 0.75 0.06 0.77 FALSE
5 GTEx Skin Sun Exposed Lower leg IPPK 0.17 0.07 enet 8 0.07 2.7e-06 -6.3 5.9 3.4e-09 -0.90 0.02 0.98 FALSE
6 GTEx Testis NFIL3 0.47 0.33 enet 8 0.29 3.8e-13 -5.6 5.7 1.6e-08 0.01 0.02 0.98 TRUE
7 The Cancer Genome Atlas Cervical Squamous Cell Carcinoma IPPK 0.06 0.03 blup 49 0.04 5.8e-03 -6.1 6.0 2.7e-09 -0.88 0.01 0.66 TRUE
8 The Cancer Genome Atlas Brain Lower Grade Glioma BICD2 0.06 0.02 blup 52 0.05 2.9e-06 -5.7 -5.7 1.1e-08 0.81 0.03 0.96 FALSE
9 The Cancer Genome Atlas Lung Adenocarcinoma ECM2 0.10 0.04 lasso 2 0.04 4.2e-05 -5.9 -5.9 3.4e-09 0.90 0.00 0.99 FALSE
10 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma IPPK 0.03 0.02 blup 51 0.01 3.2e-02 -6.0 5.8 7.8e-09 -0.87 0.03 0.66 FALSE
11 The Cancer Genome Atlas Thyroid Carcinoma IPPK 0.03 0.04 blup 50 0.04 6.7e-05 -6.0 5.7 1.2e-08 -0.94 0.01 0.98 FALSE