Best TWAS P=3.44e-09 · Best GWAS P=3.66e-10 conditioned to 0.000724
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | LMCD1 | 0.08 | 0.0 | blup | 137 | 0.04 | 2.9e-05 | -3.8 | -5.9 | 3.4e-09 | 0.61 | 0.05 | 0.72 | TRUE |
| 2 | The Cancer Genome Atlas | Skin Cutaneous Melanoma | LMCD1 | 0.17 | 0.1 | enet | 4 | 0.13 | 2.0e-04 | -5.3 | 5.8 | 6.6e-09 | -0.64 | 0.04 | 0.67 | FALSE |