Best TWAS P=1.47e-31 · Best GWAS P=2.64e-30 conditioned to 0.906
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | OTUD4 | 0.06 | 0.04 | bslmm | 272 | 0.04 | 2.6e-05 | -7.1 | -7.5 | 4.3e-14 | 0.56 | 0.49 | 0.44 | FALSE |
| 2 | GTEx | Brain Hypothalamus | HHIP-AS1 | 0.12 | 0.02 | enet | 16 | 0.04 | 4.6e-02 | 9.4 | 6.0 | 1.5e-09 | -0.47 | 0.05 | 0.33 | FALSE |
| 3 | GTEx | Pancreas | ANAPC10 | 0.14 | 0.10 | lasso | 3 | 0.10 | 4.3e-05 | -11.4 | 11.7 | 1.5e-31 | -0.88 | 0.01 | 0.97 | TRUE |
| 4 | ROSMAP | Brain Pre-frontal Cortex | OTUD4 | 0.04 | 0.03 | lasso | 2 | 0.03 | 1.4e-04 | 7.8 | -8.1 | 7.2e-16 | 0.53 | 0.62 | 0.08 | TRUE |