[Hub]/) : Traits : Forced vital capacity (FVC) :

chr5:133,164,490-134,935,530

Best TWAS P=1.41e-12 · Best GWAS P=1.59e-09 conditioned to 6.96e-07

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex CAMLG 0.39 0.35 lasso 6 0.34 1.8e-42 -5.90 -5.9 4.4e-09 0.93 0.01 0.99 FALSE
2 CommonMind Brain Pre-frontal Cortex SAR1B 0.12 0.06 lasso 6 0.09 8.1e-11 -6.04 -5.3 1.2e-07 0.85 0.00 1.00 FALSE
3 GTEx Adipose Visceral Omentum CAMLG 0.15 0.11 lasso 1 0.10 1.0e-05 -5.78 -5.8 7.5e-09 0.95 0.01 0.98 FALSE
4 GTEx Artery Aorta CAMLG 0.22 0.17 lasso 3 0.12 2.2e-07 -5.87 -5.9 4.4e-09 0.93 0.01 0.99 FALSE
5 GTEx Artery Coronary CAMLG 0.27 0.20 lasso 8 0.12 5.3e-05 -5.91 -5.9 3.4e-09 0.94 0.01 0.99 FALSE
6 GTEx Artery Tibial CAMLG 0.11 0.11 lasso 1 0.09 9.1e-08 -5.87 -5.9 4.4e-09 0.93 0.01 0.99 FALSE
7 GTEx Brain Cerebellar Hemisphere TXNDC15 0.51 0.48 lasso 5 0.47 1.2e-13 -5.06 -5.2 1.6e-07 0.72 0.24 0.76 FALSE
8 GTEx Brain Cerebellar Hemisphere CAMLG 0.42 0.24 lasso 8 0.20 8.8e-06 -5.91 -5.5 5.0e-08 0.93 0.01 0.99 FALSE
9 GTEx Brain Cerebellum CAMLG 0.31 0.27 lasso 13 0.24 7.5e-08 -5.78 -5.9 4.2e-09 0.95 0.01 0.98 FALSE
10 GTEx Brain Cortex CAMLG 0.23 0.28 lasso 10 0.26 1.1e-07 -5.78 -5.8 7.5e-09 0.95 0.01 0.98 FALSE
11 GTEx Brain Frontal Cortex BA9 CAMLG 0.36 0.30 lasso 5 0.26 1.2e-07 -5.87 -6.0 2.2e-09 0.93 0.01 0.99 FALSE
12 GTEx Brain Hypothalamus CAMLG 0.28 0.28 lasso 4 0.25 1.3e-06 -5.78 -5.8 7.0e-09 0.95 0.01 0.98 FALSE
13 GTEx Brain Nucleus accumbens basal ganglia CAMLG 0.29 0.25 enet 8 0.32 2.3e-09 -5.90 -6.0 2.7e-09 0.92 0.01 0.99 FALSE
14 GTEx Brain Putamen basal ganglia TXNDC15 0.39 -0.01 enet 22 0.06 1.6e-02 2.53 -5.3 1.5e-07 0.37 0.04 0.08 FALSE
15 GTEx Cells EBV-transformed lymphocytes PHF15 0.26 0.18 lasso 6 0.22 7.1e-08 4.29 5.4 6.9e-08 -0.30 0.49 0.33 FALSE
16 GTEx Cells Transformed fibroblasts TXNDC15 0.38 0.31 lasso 11 0.33 4.8e-25 -5.16 5.2 2.4e-07 -0.74 0.43 0.57 FALSE
17 GTEx Colon Sigmoid TXNDC15 0.19 0.12 lasso 6 0.10 1.6e-04 -5.84 -5.9 3.1e-09 0.94 0.01 0.98 FALSE
18 GTEx Colon Sigmoid CAMLG 0.16 0.01 lasso 3 0.00 2.9e-01 -5.91 -5.4 8.5e-08 0.88 0.02 0.85 FALSE
19 GTEx Colon Transverse TXNDC15 0.22 -0.01 lasso 7 -0.01 6.8e-01 -5.06 -5.5 4.8e-08 0.74 0.02 0.78 FALSE
20 GTEx Colon Transverse SAR1B 0.11 0.00 enet 17 0.03 1.2e-02 -5.84 -6.7 1.7e-11 0.58 0.02 0.74 TRUE
21 GTEx Esophagus Muscularis CAMLG 0.23 0.17 lasso 5 0.15 1.3e-09 -5.91 -5.9 4.0e-09 0.95 0.01 0.99 FALSE
22 GTEx Heart Atrial Appendage CAMLG 0.14 0.03 lasso 4 0.03 2.0e-02 -5.90 -5.6 2.3e-08 0.90 0.01 0.95 FALSE
23 GTEx Lung CAMLG 0.11 0.11 enet 7 0.11 9.1e-09 -5.87 -6.1 1.3e-09 0.93 0.01 0.99 FALSE
24 GTEx Muscle Skeletal SAR1B 0.10 0.04 lasso 7 0.04 6.1e-05 2.80 -5.5 3.5e-08 0.62 0.02 0.92 FALSE
25 GTEx Muscle Skeletal CAMLG 0.08 0.01 enet 28 0.05 2.0e-05 -0.17 -6.3 2.4e-10 0.43 0.02 0.61 TRUE
26 GTEx Nerve Tibial CAMLG 0.25 0.19 lasso 5 0.19 1.5e-13 -5.84 -5.9 3.7e-09 0.95 0.01 0.99 FALSE
27 GTEx Pituitary CAMLG 0.20 0.07 enet 10 0.09 3.3e-03 -5.78 -5.8 7.2e-09 0.92 0.01 0.98 FALSE
28 GTEx Skin Sun Exposed Lower leg CAMLG 0.11 0.05 lasso 2 0.03 2.9e-03 -5.78 -5.9 4.5e-09 0.92 0.01 0.98 TRUE
29 GTEx Thyroid TXNDC15 0.24 0.22 enet 8 0.24 3.0e-18 -5.16 -5.2 2.2e-07 0.70 0.43 0.57 FALSE
30 GTEx Thyroid CAMLG 0.21 0.21 lasso 5 0.21 3.3e-16 -5.78 -5.9 3.9e-09 0.95 0.01 0.99 FALSE
31 METSIM Adipose CAMLG 0.14 0.18 enet 8 0.21 4.0e-30 -5.87 -5.8 5.6e-09 0.94 0.01 0.99 FALSE
32 METSIM Adipose SAR1B 0.06 0.02 bslmm 288 0.03 3.1e-05 -5.90 -7.1 1.4e-12 0.66 0.01 0.97 TRUE
33 ROSMAP Brain Pre-frontal Cortex TXNDC15 0.19 0.10 bslmm 324 0.14 1.2e-17 -5.06 -5.1 2.6e-07 0.62 0.33 0.67 FALSE
34 ROSMAP Brain Pre-frontal Cortex CAMLG 0.47 0.52 lasso 8 0.52 2.2e-79 -5.90 -5.9 3.2e-09 0.94 0.01 0.99 FALSE
35 YFS Blood CAMLG 0.12 0.19 bslmm 295 0.20 1.2e-61 -5.87 -6.0 2.2e-09 0.92 0.01 0.99 FALSE
36 The Cancer Genome Atlas Bladder Urothelial Carcinoma CAMLG 0.10 0.04 blup 17 0.04 2.2e-04 -5.90 -5.3 1.3e-07 0.28 0.00 0.96 TRUE
37 The Cancer Genome Atlas Breast Invasive Carcinoma TXNDC15 0.05 0.06 lasso 3 0.06 1.9e-11 -5.14 5.3 9.4e-08 -0.77 0.15 0.85 FALSE
38 The Cancer Genome Atlas Colon Adenocarcinoma TXNDC15 0.13 0.08 blup 43 0.09 9.7e-06 -5.14 5.9 4.2e-09 -0.75 0.09 0.87 FALSE
39 The Cancer Genome Atlas Glioblastoma Multiforme CAMLG 0.29 0.18 lasso 3 0.13 9.6e-05 -5.90 -6.1 8.6e-10 0.92 0.00 0.99 FALSE
40 The Cancer Genome Atlas Glioblastoma Multiforme TXNDC15 0.27 0.07 lasso 2 0.11 3.2e-04 -5.06 5.2 2.4e-07 -0.74 0.03 0.46 FALSE
41 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma CAMLG 0.05 0.01 blup 18 0.02 1.4e-03 -5.90 -5.1 2.9e-07 0.35 0.00 0.69 FALSE
42 The Cancer Genome Atlas Brain Lower Grade Glioma CAMLG 0.08 0.05 lasso 1 0.04 1.8e-05 -5.90 -5.9 3.6e-09 0.93 0.00 1.00 FALSE
43 The Cancer Genome Atlas Lung Adenocarcinoma TXNDC15 0.05 0.05 lasso 1 0.04 1.0e-05 -5.16 5.2 2.5e-07 -0.73 0.14 0.84 FALSE
44 The Cancer Genome Atlas Lung Squamous Cell Carcinoma TXNDC15 0.03 0.03 blup 35 0.03 5.6e-04 -5.06 5.2 1.7e-07 -0.78 0.02 0.85 FALSE
45 The Cancer Genome Atlas Pancreatic Adenocarcinoma TXNDC15 0.23 0.21 enet 10 0.20 1.1e-08 -5.16 5.4 6.9e-08 -0.81 0.03 0.97 FALSE
46 The Cancer Genome Atlas Prostate Adenocarcinoma CAMLG 0.13 0.07 lasso 3 0.05 2.0e-06 -5.90 -5.9 4.3e-09 0.92 0.00 1.00 FALSE
47 The Cancer Genome Atlas Prostate Adenocarcinoma TXNDC15 0.07 0.04 lasso 4 0.04 6.2e-05 -5.06 5.3 1.1e-07 -0.76 0.07 0.74 FALSE
48 The Cancer Genome Atlas Thyroid Carcinoma CAMLG 0.26 0.21 lasso 2 0.21 5.2e-20 -5.90 -5.9 4.9e-09 0.93 0.00 1.00 FALSE