Best TWAS P=1.86e-08 · Best GWAS P=3.93e-09 conditioned to 0.000494
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Tibial | TMEM87B | 0.12 | 0.08 | lasso | 9 | 0.07 | 5.5e-06 | -5.5 | -5.5 | 4.9e-08 | 0.96 | 0.04 | 0.96 | FALSE |
2 | GTEx | Thyroid | TMEM87B | 0.09 | 0.00 | lasso | 5 | 0.01 | 1.1e-01 | 4.7 | 5.6 | 1.9e-08 | -0.52 | 0.06 | 0.54 | TRUE |