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Traits
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Heel bone mineral density (BMD) T-score, automated (left)
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chr17:27,244,473-28,642,380
Best TWAS P=1.56e-08 · Best GWAS P=5.58e-09 conditioned to 0.0919
27.2M
27.4M
27.6M
27.8M
28M
28.2M
28.4M
28.6M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
The Cancer Genome Atlas
Thyroid Carcinoma
GIT1
0.06
0.05
blup
47
0.05
5.2e-06
-4.9
5.7
1.6e-08
-0.90
0.01
0.99
TRUE
1
GTEx
Brain Nucleus accumbens basal ganglia
CORO6
0.11
0.10
lasso
2
0.05
2.2e-02
4.9
-5.6
2.6e-08
0.95
0.03
0.89
FALSE
2
METSIM
Adipose
CORO6
0.02
0.02
bslmm
314
0.01
1.7e-02
4.3
-5.6
2.6e-08
0.85
0.02
0.95
FALSE