Best TWAS P=1.3e-08 · Best GWAS P=2.99e-07 conditioned to 0.547
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Colon Transverse | LSMD1 | 0.28 | 0.12 | lasso | 5 | 0.19 | 3.3e-09 | -5.1 | -5.7 | 1.3e-08 | 0.84 | 0.01 | 0.99 | TRUE |
| 2 | YFS | Blood | CYB5D1 | 0.28 | 0.19 | bslmm | 488 | 0.24 | 5.9e-79 | -4.8 | 5.4 | 7.2e-08 | -0.80 | 0.01 | 0.98 | FALSE |