Best TWAS P=1.29e-16 · Best GWAS P=5.01e-22 conditioned to 1.98e-24
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Breast Invasive Carcinoma | WNT4 | 0.03 | 0.01 | blup | 72 | 0.02 | 3.8e-05 | -6.5 | -8.3 | 1.3e-16 | 0.06 | 0.00 | 0.99 | TRUE |
| 2 | The Cancer Genome Atlas | Prostate Adenocarcinoma | WNT4 | 0.05 | 0.01 | blup | 69 | 0.01 | 1.1e-02 | -2.5 | 5.3 | 1.0e-07 | -0.03 | 0.02 | 0.36 | FALSE |