Best TWAS P=6.21e-09 · Best GWAS P=4.33e-08 conditioned to 0.35
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | COPA | 0.09 | 0.08 | lasso | 2 | 0.08 | 6.1e-10 | -5.4 | 5.8 | 6.2e-09 | -0.86 | 0 | 1.00 | TRUE |
| 2 | The Cancer Genome Atlas | Prostate Adenocarcinoma | COPA | 0.05 | 0.03 | lasso | 3 | 0.03 | 8.3e-04 | -5.3 | 5.3 | 1.1e-07 | -0.97 | 0 | 0.96 | FALSE |